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IMGVR_UViG_3300033144_009684-3300033144-Ga0366838_10361281
Arc-VirIMGVR_UViG_3300033144_009684-3300033144-Ga0366838_10361281
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 43-175
Domain cluster:
rep: IMGVR_UViG_3300021379_002009-3300021379-Ga0213864_100006869__D171-297
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04055.28 best | Radical_SAM | 29.6 | 1.00e-06 | 66.9% | 34.9% |
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ciwA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 56.0 | 4.08e-01 | 81.2% | 31.1% |
| 3op2A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.68 | 49.0 | 4.02e-01 | 98.5% | 40.7% |
| 1ojxE00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 47.0 | 3.81e-01 | 98.5% | 38.9% |
| 3tw6B03 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 52.0 | 3.44e-01 | 95.5% | 21.3% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 54.0 | 4.29e-01 | 98.5% | 45.2% |
| 6hfzA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.63 | 45.0 | 3.82e-01 | 92.5% | 45.3% |
| 1fuyB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 38.0 | 3.53e-01 | 87.2% | 47.6% |
| 2bb0A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 50.0 | 3.85e-01 | 96.2% | 38.3% |
| 5dmmA00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.61 | 56.0 | 4.32e-01 | 99.2% | 50.7% |
| 8ea4D01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 48.0 | 4.54e-01 | 83.5% | 96.2% |
| 6ndsA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 52.0 | 3.99e-01 | 99.2% | 40.7% |
| 1qwgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 49.0 | 3.96e-01 | 94.7% | 45.8% |
| 3qhqB01 | 3.40.50.11940 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 45.0 | 4.35e-01 | 83.5% | 69.8% |
| 3ab8A00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 38.0 | 3.11e-01 | 88.0% | 32.6% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.60 | 54.0 | 4.51e-01 | 100.0% | 59.7% |
| 3qfeB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 48.0 | 3.68e-01 | 97.7% | 38.1% |
| 4htlA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 43.0 | 3.85e-01 | 75.9% | 88.9% |
| 4joqA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 37.0 | 3.67e-01 | 86.5% | 58.2% |
| 1cr2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 47.0 | 3.84e-01 | 84.2% | 68.2% |
| 1vcvA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 48.0 | 4.09e-01 | 98.5% | 52.7% |
| 5jicA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 43.0 | 3.89e-01 | 76.7% | 99.5% |
| 3bf0C03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.58 | 42.0 | 3.95e-01 | 91.0% | 59.9% |
| 2f6uA00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.57 | 50.0 | 4.19e-01 | 95.5% | 55.0% |
| 1k70A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 46.0 | 3.56e-01 | 100.0% | 37.8% |
| 4d8lA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 46.0 | 3.60e-01 | 98.5% | 39.5% |
| 4ogzA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 51.0 | 3.99e-01 | 98.5% | 54.8% |
| 3wnkA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 52.0 | 3.84e-01 | 100.0% | 44.2% |
| 2h1iA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 48.0 | 4.18e-01 | 93.2% | 84.9% |
| 2deoB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 41.0 | 3.62e-01 | 75.9% | 82.5% |
| 3lmkA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 45.0 | 4.16e-01 | 84.2% | 73.4% |
| 2q09A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 49.0 | 3.82e-01 | 100.0% | 42.8% |
| 4tl8F00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 45.0 | 3.82e-01 | 84.2% | 60.6% |
| 6cblD01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 44.0 | 3.69e-01 | 82.7% | 53.5% |
| 4pg4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 39.0 | 3.68e-01 | 86.5% | 60.0% |
| 3vk5B00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.55 | 48.0 | 3.91e-01 | 95.5% | 50.0% |
| 1c2yA00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.54 | 39.0 | 3.70e-01 | 72.9% | 78.7% |
| 2xblD00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.54 | 42.0 | 3.68e-01 | 81.2% | 66.2% |
| 1reqA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.54 | 47.0 | 4.38e-01 | 94.0% | 85.4% |
| 1nriA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.54 | 41.0 | 3.41e-01 | 82.0% | 51.6% |
| 4i99A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 3.29e-01 | 86.5% | 79.5% |
| 5fbhA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 43.0 | 3.81e-01 | 84.2% | 63.6% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 3.90e-01 | 82.7% | 75.6% |
| 1tqxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 4.00e-01 | 98.5% | 59.3% |
| 3u80A00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.53 | 39.0 | 3.98e-01 | 87.2% | 80.3% |
| 2iw3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.56e-01 | 85.7% | 60.7% |
| 3qz6A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.52 | 47.0 | 3.75e-01 | 98.5% | 52.5% |
| 1yh0A02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.52 | 41.0 | 3.79e-01 | 84.2% | 93.0% |
| 3geeA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 4.01e-01 | 90.2% | 80.5% |
| 3vpgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 37.0 | 3.72e-01 | 99.2% | 70.9% |
| 2hoeA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 36.0 | 3.53e-01 | 71.4% | 100.0% |
| 5ailA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 45.0 | 4.13e-01 | 98.5% | 80.6% |
| 2iw3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.41e-01 | 85.0% | 81.9% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 3.70e-01 | 82.7% | 89.7% |
| 2h3hA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 37.0 | 3.65e-01 | 100.0% | 69.6% |
| 5nnnA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.51 | 38.0 | 3.66e-01 | 90.2% | 67.3% |
| 2yweA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 41.0 | 3.90e-01 | 98.5% | 72.8% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.50 | 36.0 | 3.58e-01 | 75.2% | 85.3% |
| 4finB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 40.0 | 3.28e-01 | 86.5% | 56.1% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5055657 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.92 | 64.0 | 4.91e-01 | 85.0% | 35.2% |
| 5050557 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.90 | 66.0 | 5.09e-01 | 75.2% | 39.2% |
| 4942830 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 73.0 | 5.40e-01 | 86.5% | 38.2% |
| 4976540 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.89 | 65.0 | 5.01e-01 | 75.2% | 39.2% |
| 4075465 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 72.0 | 5.52e-01 | 85.0% | 41.5% |
| 5052817 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 64.0 | 5.01e-01 | 74.4% | 39.6% |
| 4630647 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 63.0 | 4.77e-01 | 72.9% | 37.8% |
| 5058428 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 67.0 | 5.22e-01 | 79.7% | 40.5% |
| 4997146 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.88 | 66.0 | 5.06e-01 | 78.2% | 38.1% |
| 4631270 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 67.0 | 5.11e-01 | 78.9% | 38.5% |
| 4942734 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 63.0 | 4.75e-01 | 74.4% | 34.4% |
| 5072313 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 66.0 | 5.05e-01 | 85.0% | 38.1% |
| 4942889 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 69.0 | 5.35e-01 | 82.0% | 42.4% |
| 4989373 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 63.0 | 5.01e-01 | 85.0% | 40.8% |
| 4954760 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 69.0 | 5.12e-01 | 88.0% | 36.6% |
| 5056543 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 64.0 | 5.05e-01 | 85.0% | 40.4% |
| 4967352 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 67.0 | 5.08e-01 | 82.0% | 37.9% |
| 4975604 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.86 | 65.0 | 5.02e-01 | 83.5% | 39.2% |
| 4931238 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.86 | 69.0 | 5.31e-01 | 87.2% | 40.7% |
| 5056467 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.86 | 63.0 | 4.86e-01 | 75.2% | 38.5% |
| 5043362 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.86 | 68.0 | 5.11e-01 | 83.5% | 38.6% |
| 5055473 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 67.0 | 5.09e-01 | 82.0% | 38.9% |
| 4974554 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 67.0 | 5.01e-01 | 82.7% | 36.9% |
| 5074581 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 64.0 | 4.85e-01 | 88.7% | 36.8% |
| 5074274 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 60.0 | 4.84e-01 | 72.9% | 43.3% |
| 4989163 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 63.0 | 5.05e-01 | 85.7% | 42.5% |
| 4930153 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 67.0 | 5.06e-01 | 85.0% | 38.6% |
| 5029697 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 68.0 | 5.05e-01 | 84.2% | 37.3% |
| 4151287 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 66.0 | 4.92e-01 | 85.0% | 36.0% |
| 5051867 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 66.0 | 5.08e-01 | 84.2% | 40.0% |
| 5049232 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 71.0 | 5.34e-01 | 90.2% | 40.3% |
| 5065620 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 63.0 | 5.31e-01 | 85.0% | 49.8% |
| 4968396 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 70.0 | 5.25e-01 | 87.2% | 40.5% |
| 4942410 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 75.0 | 5.25e-01 | 93.2% | 35.6% |
| 5033154 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 67.0 | 5.08e-01 | 83.5% | 39.6% |
| 4935184 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 67.0 | 5.31e-01 | 85.7% | 44.6% |
| 5066168 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 67.0 | 5.08e-01 | 88.0% | 38.6% |
| 4183685 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 64.0 | 4.62e-01 | 85.7% | 32.4% |
| 4999400 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 68.0 | 5.08e-01 | 86.5% | 45.1% |
| 3956953 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 67.0 | 5.09e-01 | 88.0% | 41.1% |
| 5066957 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 67.0 | 5.01e-01 | 97.7% | 38.0% |
| 5066470 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 68.0 | 5.13e-01 | 99.2% | 40.0% |
| 5052545 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 63.0 | 4.82e-01 | 82.7% | 38.9% |
| 5051449 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 57.0 | 4.54e-01 | 85.0% | 38.5% |
| 5083828 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 66.0 | 4.94e-01 | 87.2% | 41.0% |
| 4953258 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 57.0 | 4.31e-01 | 82.7% | 33.1% |
| 5036843 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 55.0 | 4.46e-01 | 78.9% | 39.6% |
| 3602542 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 59.0 | 4.51e-01 | 84.2% | 36.6% |
| 5046299 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 59.0 | 4.50e-01 | 85.0% | 36.2% |
| 4834102 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 55.0 | 4.72e-01 | 72.9% | 50.2% |
| 4943846 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.77 | 56.0 | 4.34e-01 | 82.0% | 35.7% |
| 5064319 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 55.0 | 4.02e-01 | 85.7% | 28.8% |
| 5079264 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 56.0 | 4.25e-01 | 82.0% | 33.9% |
| 4128825 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.75 | 57.0 | 4.25e-01 | 88.0% | 33.7% |
| 4046355 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.74 | 55.0 | 4.13e-01 | 77.4% | 34.6% |
| 4640072 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.74 | 55.0 | 4.05e-01 | 77.4% | 33.0% |
| 4194365 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.73 | 55.0 | 3.39e-01 | 78.2% | 14.7% |
| 4681042 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.73 | 54.0 | 3.97e-01 | 77.4% | 32.1% |
| 5031416 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.72 | 59.0 | 4.74e-01 | 88.7% | 46.9% |
| 4607381 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.72 | 56.0 | 4.12e-01 | 81.2% | 34.5% |
| 4192268 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.71 | 55.0 | 4.13e-01 | 81.2% | 35.9% |
| 4085830 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.71 | 55.0 | 3.98e-01 | 80.5% | 32.6% |
| 4927433 | 2002.1.1.443 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BATS | 0.71 | 55.0 | 4.08e-01 | 81.2% | 35.4% |
| 5024332 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 54.0 | 3.93e-01 | 81.2% | 32.9% |
| 4564319 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.69 | 54.0 | 3.89e-01 | 81.2% | 34.4% |
| 4084861 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.69 | 53.0 | 4.00e-01 | 81.2% | 36.3% |
| 5043861 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 53.0 | 4.36e-01 | 99.2% | 46.0% |
| 4992726 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 61.0 | 4.80e-01 | 99.2% | 48.5% |
| 4979879 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.66 | 60.0 | 4.66e-01 | 99.2% | 46.7% |
| 4961657 | 2002.1.1.443 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BATS | 0.66 | 52.0 | 3.90e-01 | 99.2% | 33.2% |
| 3696439 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.64 | 54.0 | 4.25e-01 | 98.5% | 43.6% |
| 4943078 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.61 | 49.0 | 3.57e-01 | 96.2% | 30.4% |
| 4864355 | 2488.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_4 | 0.61 | 37.0 | 3.44e-01 | 75.2% | 47.6% |
| 4992604 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.61 | 45.0 | 4.30e-01 | 100.0% | 65.0% |
| 3212023 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.58 | 43.0 | 3.40e-01 | 77.4% | 52.7% |
| 3604607 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 53.0 | 4.29e-01 | 100.0% | 57.6% |
| 5039447 | 7604.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N | 0.57 | 41.0 | 4.08e-01 | 74.4% | 87.9% |
| 4641125 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.56 | 44.0 | 3.29e-01 | 85.7% | 94.3% |
| 4057316 | 2003.1.1.310 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PF27272 | 0.54 | 39.0 | 4.08e-01 | 83.5% | 83.3% |
| 3564049 | 207.1.1.157 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF29252 | 0.53 | 44.0 | 3.12e-01 | 99.2% | 27.2% |
| 4029300 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 47.0 | 4.07e-01 | 97.7% | 80.3% |
| 4973872 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.53 | 33.0 | 3.37e-01 | 93.2% | 61.5% |
| 3968239 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.53 | 40.0 | 3.55e-01 | 80.5% | 69.2% |
| 4991816 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.52 | 38.0 | 3.89e-01 | 90.2% | 76.9% |
| 4425802 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.51 | 46.0 | 3.64e-01 | 100.0% | 65.3% |
| 4209848 | 2004.1.1.108 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SulA | 0.51 | 36.0 | 3.50e-01 | 72.9% | 68.0% |
| 4270708 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.50 | 44.0 | 4.39e-01 | 94.0% | 98.5% |
D2
medium
residues 176-331
Domain cluster:
rep: BML_08182015_1_5m_scaffold_19_prodigal-single.1__X__X__00140__D173-298
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c8fA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 56.0 | 4.79e-01 | 100.0% | 50.6% |
| 3sqsA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.70 | 42.0 | 3.62e-01 | 99.4% | 37.5% |
| 3d03A01 | 3.60.21.40 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain | 0.68 | 43.0 | 4.65e-01 | 98.7% | 74.8% |
| 3rr1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.65 | 41.0 | 3.54e-01 | 99.4% | 40.1% |
| 2bgwB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 38.0 | 4.19e-01 | 78.2% | 69.5% |
| 4dghA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.64 | 43.0 | 4.70e-01 | 99.4% | 82.0% |
| 1rvkA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.64 | 42.0 | 3.51e-01 | 99.4% | 38.3% |
| 3av0A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.64 | 44.0 | 3.73e-01 | 99.4% | 43.2% |
| 4o1eB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.64 | 46.0 | 3.86e-01 | 100.0% | 43.4% |
| 3bosB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 39.0 | 3.87e-01 | 100.0% | 57.4% |
| 3canA00 | 3.80.30.10 | Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › pyruvate-formate lyase- activating enzyme | 0.63 | 52.0 | 5.22e-01 | 100.0% | 84.5% |
| 1f6yA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.63 | 46.0 | 3.89e-01 | 100.0% | 45.3% |
| 2podA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.63 | 44.0 | 3.68e-01 | 99.4% | 42.6% |
| 3n4fA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.63 | 42.0 | 3.56e-01 | 99.4% | 39.9% |
| 7bobA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 50.0 | 3.81e-01 | 99.4% | 37.2% |
| 3cqjA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.61 | 47.0 | 3.83e-01 | 100.0% | 44.9% |
| 1rh9A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 54.0 | 4.08e-01 | 98.1% | 40.5% |
| 4da2A02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.60 | 41.0 | 4.18e-01 | 96.2% | 70.4% |
| 2qq6A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.60 | 44.0 | 3.72e-01 | 99.4% | 44.9% |
| 5facA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.60 | 49.0 | 4.32e-01 | 100.0% | 60.6% |
| 1vffA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 53.0 | 3.88e-01 | 97.4% | 39.7% |
| 1fcdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 37.0 | 3.90e-01 | 95.5% | 69.1% |
| 2i5qA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 43.0 | 3.69e-01 | 100.0% | 48.5% |
| 3vdhA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 53.0 | 4.13e-01 | 98.1% | 54.6% |
| 6ki3A01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.59 | 49.0 | 3.96e-01 | 100.0% | 47.1% |
| 7blfB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 53.0 | 4.00e-01 | 99.4% | 59.7% |
| 2qiwA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.58 | 46.0 | 4.01e-01 | 100.0% | 55.1% |
| 4r27B00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 52.0 | 3.85e-01 | 98.1% | 54.8% |
| 3b4uA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 44.0 | 3.55e-01 | 100.0% | 42.5% |
| 4ov4A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 49.0 | 4.03e-01 | 100.0% | 51.1% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 38.0 | 4.07e-01 | 76.9% | 78.0% |
| 6mp7A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 51.0 | 4.00e-01 | 98.1% | 53.9% |
| 3igzB02 | 3.40.1450.10 | Alpha Beta › 3-Layer(aba) Sandwich › 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain › BPG-independent phosphoglycerate mutase, domain B | 0.56 | 52.0 | 4.44e-01 | 100.0% | 63.5% |
| 6hcdD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 34.0 | 3.61e-01 | 75.0% | 67.4% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 46.0 | 3.63e-01 | 100.0% | 45.0% |
| 2bpoA04 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.55 | 35.0 | 3.50e-01 | 77.6% | 59.9% |
| 2o3jB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 40.0 | 3.61e-01 | 100.0% | 55.2% |
| 3ihjA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.55 | 45.0 | 3.85e-01 | 90.4% | 55.3% |
| 1fcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 50.0 | 3.96e-01 | 100.0% | 74.8% |
| 2yx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 50.0 | 3.91e-01 | 100.0% | 52.2% |
| 1v77A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 42.0 | 3.91e-01 | 100.0% | 63.9% |
| 3vkgA07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 3.04e-01 | 98.7% | 31.8% |
| 3msrA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 48.0 | 3.70e-01 | 98.1% | 87.5% |
| 7jgsG01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 38.0 | 3.80e-01 | 99.4% | 70.3% |
| 4mupB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 45.0 | 3.69e-01 | 100.0% | 50.0% |
| 3bwwA01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.53 | 45.0 | 3.85e-01 | 100.0% | 56.9% |
| 2vycA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 42.0 | 4.42e-01 | 97.4% | 93.5% |
| 2cx6A00 | 3.30.370.10 | Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › Barstar-like | 0.53 | 31.0 | 3.87e-01 | 89.7% | 100.0% |
| 4yrbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 42.0 | 3.88e-01 | 85.9% | 66.5% |
| 3cr8C02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 32.0 | 3.00e-01 | 76.3% | 47.0% |
| 2ddxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 48.0 | 3.74e-01 | 100.0% | 61.1% |
| 3zbqA00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.52 | 46.0 | 3.62e-01 | 95.5% | 88.3% |
| 2btoA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.51 | 46.0 | 3.91e-01 | 98.7% | 95.4% |
| 2wabA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 47.0 | 4.21e-01 | 100.0% | 96.7% |
| 3n05A01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.51 | 45.0 | 3.67e-01 | 98.1% | 92.7% |
| 2xsaA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 46.0 | 3.84e-01 | 100.0% | 60.3% |
| 4dnhA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 47.0 | 3.50e-01 | 100.0% | 41.6% |
| 7v58A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 42.0 | 3.64e-01 | 99.4% | 58.1% |
| 1bs0A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 40.0 | 3.54e-01 | 99.4% | 57.5% |
| 3t1iD01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.50 | 44.0 | 3.61e-01 | 99.4% | 51.2% |
| 8hi7B01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.50 | 46.0 | 3.76e-01 | 100.0% | 55.1% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838601 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.87 | 65.0 | 5.53e-01 | 100.0% | 51.3% |
| 4956871 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.86 | 64.0 | 4.91e-01 | 100.0% | 37.4% |
| 5022670 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 63.0 | 4.99e-01 | 100.0% | 40.3% |
| 4398567 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 63.0 | 5.40e-01 | 100.0% | 50.6% |
| 4999400 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 77.0 | 6.07e-01 | 99.4% | 50.5% |
| 5048543 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 72.0 | 5.69e-01 | 100.0% | 47.8% |
| 5051449 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 67.0 | 5.53e-01 | 100.0% | 50.4% |
| 3602542 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 63.0 | 5.01e-01 | 100.0% | 43.0% |
| 4075465 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 73.0 | 5.95e-01 | 100.0% | 55.2% |
| 3286714 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 68.0 | 5.21e-01 | 100.0% | 43.5% |
| 4943846 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.80 | 64.0 | 5.18e-01 | 100.0% | 46.8% |
| 5048003 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 61.0 | 4.61e-01 | 100.0% | 36.8% |
| 3388141 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 64.0 | 5.13e-01 | 100.0% | 46.3% |
| 3981003 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 57.0 | 4.37e-01 | 100.0% | 35.7% |
| 4930546 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 65.0 | 4.98e-01 | 100.0% | 41.5% |
| 3972156 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 62.0 | 4.58e-01 | 100.0% | 34.7% |
| 3587896 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 66.0 | 5.13e-01 | 100.0% | 45.7% |
| 3326303 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 65.0 | 4.99e-01 | 100.0% | 42.5% |
| 4988322 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 73.0 | 5.86e-01 | 100.0% | 58.6% |
| 5043101 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.76 | 71.0 | 5.49e-01 | 100.0% | 64.3% |
| 5027330 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.76 | 65.0 | 4.98e-01 | 100.0% | 43.1% |
| 5018576 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.75 | 60.0 | 4.61e-01 | 100.0% | 40.0% |
| 5040766 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.74 | 61.0 | 4.68e-01 | 100.0% | 40.6% |
| 4373133 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 62.0 | 4.57e-01 | 100.0% | 37.3% |
| 5031360 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 70.0 | 5.53e-01 | 100.0% | 60.7% |
| 5031653 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 69.0 | 5.49e-01 | 100.0% | 60.7% |
| 4983624 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.72 | 68.0 | 5.11e-01 | 100.0% | 57.7% |
| 5051176 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 59.0 | 4.46e-01 | 100.0% | 38.9% |
| 4942058 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 66.0 | 4.65e-01 | 100.0% | 72.9% |
| 4997440 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.70 | 40.0 | 4.36e-01 | 75.0% | 66.2% |
| 4948507 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 66.0 | 5.98e-01 | 100.0% | 77.3% |
| 5079264 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 65.0 | 5.13e-01 | 100.0% | 52.2% |
| 181863 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.69 | 42.0 | 3.61e-01 | 99.4% | 37.8% |
| 5073292 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 64.0 | 4.99e-01 | 100.0% | 50.0% |
| 3659822 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.68 | 41.0 | 4.56e-01 | 76.9% | 75.2% |
| 5079855 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 37.0 | 3.79e-01 | 77.6% | 54.2% |
| 3421599 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.66 | 40.0 | 2.92e-01 | 78.2% | 22.8% |
| 4979879 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.66 | 58.0 | 4.64e-01 | 100.0% | 50.5% |
| 4979883 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.65 | 39.0 | 4.08e-01 | 76.3% | 64.3% |
| 5055301 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 55.0 | 4.79e-01 | 100.0% | 60.0% |
| None | — | 0.64 | 37.0 | 3.28e-01 | 75.0% | 38.3% | |
| 5050866 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 56.0 | 4.82e-01 | 100.0% | 61.3% |
| 4021476 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.64 | 37.0 | 3.33e-01 | 75.0% | 40.9% |
| 3952798 | 2002.1.1.121 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C | 0.63 | 51.0 | 3.95e-01 | 100.0% | 39.1% |
| 4951954 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 59.0 | 4.59e-01 | 100.0% | 52.2% |
| 4950724 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 58.0 | 4.61e-01 | 100.0% | 53.1% |
| 5022820 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 41.0 | 3.74e-01 | 76.9% | 50.5% |
| 3309770 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.62 | 41.0 | 4.27e-01 | 76.3% | 70.0% |
| 5080126 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 58.0 | 4.56e-01 | 100.0% | 67.5% |
| 5001248 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 54.0 | 4.53e-01 | 100.0% | 56.9% |
| 4078999 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 57.0 | 4.84e-01 | 100.0% | 63.3% |
| 3616981 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.61 | 44.0 | 4.08e-01 | 99.4% | 58.5% |
| 5049899 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.61 | 52.0 | 4.66e-01 | 100.0% | 65.6% |
| 3741420 | 2004.1.1.432 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 | 0.61 | 38.0 | 3.39e-01 | 98.1% | 44.7% |
| 5071385 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 56.0 | 4.66e-01 | 100.0% | 62.6% |
| 3174873 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.60 | 45.0 | 4.11e-01 | 98.7% | 59.2% |
| 4985079 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.60 | 36.0 | 3.85e-01 | 76.3% | 66.7% |
| 3590188 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 56.0 | 4.59e-01 | 100.0% | 59.3% |
| 3967795 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.60 | 45.0 | 3.53e-01 | 99.4% | 38.4% |
| 4934759 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 55.0 | 4.62e-01 | 100.0% | 61.9% |
| 3622022 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.59 | 38.0 | 3.82e-01 | 78.2% | 63.2% |
| 4679851 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 54.0 | 4.56e-01 | 100.0% | 60.8% |
| 3612299 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.59 | 41.0 | 4.61e-01 | 98.1% | 92.5% |
| 3939161 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 46.0 | 3.27e-01 | 99.4% | 29.4% |
| 3685610 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.57 | 45.0 | 4.52e-01 | 98.7% | 81.2% |
| 4959820 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 35.0 | 3.66e-01 | 76.9% | 66.4% |
| 5063001 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.56 | 44.0 | 3.56e-01 | 100.0% | 45.4% |
| 3182339 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.56 | 52.0 | 4.31e-01 | 100.0% | 90.2% |
| 4940259 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.56 | 41.0 | 3.78e-01 | 99.4% | 58.0% |
| 4931388 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 34.0 | 3.51e-01 | 76.9% | 62.0% |
| 4585902 | 7516.1.1.6 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 | 0.56 | 41.0 | 2.86e-01 | 76.9% | 25.7% |
| 4948408 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.55 | 41.0 | 3.26e-01 | 76.9% | 84.9% |
| 3348352 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.54 | 37.0 | 3.55e-01 | 77.6% | 60.6% |
| 4015087 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.53 | 45.0 | 3.58e-01 | 99.4% | 44.0% |
| 5065946 | 2002.1.1.139 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BKACE | 0.53 | 48.0 | 3.83e-01 | 99.4% | 55.5% |
| None | — | 0.53 | 47.0 | 3.79e-01 | 100.0% | 49.7% | |
| 5026056 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.52 | 45.0 | 3.62e-01 | 100.0% | 48.0% |
| 3178257 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.52 | 48.0 | 4.52e-01 | 100.0% | 95.1% |
| 4945737 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.52 | 37.0 | 3.77e-01 | 100.0% | 74.2% |
| 4996064 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.52 | 42.0 | 3.70e-01 | 99.4% | 59.0% |
| 3190068 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 47.0 | 3.43e-01 | 100.0% | 70.2% |
| 3777835 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.51 | 47.0 | 3.50e-01 | 100.0% | 43.2% |
| 3209204 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.51 | 44.0 | 3.64e-01 | 100.0% | 54.3% |