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IMGVR_UViG_3300033148_001868-3300033148-Ga0366832_105676813

Arc-Vir

IMGVR_UViG_3300033148_001868-3300033148-Ga0366832_105676813

Identity

Kingdom:
archaea

Quality

80.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-63
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.56 35.0 3.28e-01 98.2% 49.3%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 37.0 3.42e-01 100.0% 60.3%
4uijA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.52 37.0 3.00e-01 76.4% 81.7%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 32.0 2.69e-01 100.0% 37.6%
4cooA03 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 42.0 3.30e-01 100.0% 70.8%
3ktzA02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.51 33.0 2.97e-01 85.5% 42.2%
2rghA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 42.0 2.83e-01 100.0% 55.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3502554 221.2.1.1 ↗ a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N 0.59 38.0 3.67e-01 89.1% 52.3%
3756402 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.54 44.0 2.63e-01 96.4% 12.4%
3875632 5054.1.1.63 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C 0.54 43.0 2.64e-01 96.4% 13.4%
5016411 282.1.1.0 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.54 38.0 3.03e-01 76.4% 73.1%
3970788 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.54 43.0 3.14e-01 92.7% 73.8%
3509327 2003.1.2.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.52 44.0 2.67e-01 100.0% 81.6%