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IMGVR_UViG_3300033148_001868-3300033148-Ga0366832_10567682
Arc-VirIMGVR_UViG_3300033148_001868-3300033148-Ga0366832_10567682
Identity
- Kingdom:
- archaea
Quality
67.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-68
Domain cluster:
rep: NC_015938.1__YP_004782441.1__SaPh711_gp066__00066__D27-90
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.82 | 60.0 | 6.18e-01 | 75.4% | 81.5% |
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.66 | 57.0 | 4.33e-01 | 100.0% | 71.8% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.60 | 51.0 | 4.48e-01 | 93.0% | 69.9% |
| 1x6aA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.54 | 41.0 | 4.06e-01 | 84.2% | 96.8% |
| 2zjrG00 | 3.90.1180.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 | 0.53 | 37.0 | 2.84e-01 | 75.4% | 45.1% |
| 1tj7A02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.53 | 38.0 | 2.53e-01 | 80.7% | 85.7% |
| 2qg6A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 36.0 | 2.60e-01 | 77.2% | 58.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3395505 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.77 | 49.0 | 5.35e-01 | 71.9% | 82.2% |
| 3211971 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 49.0 | 5.69e-01 | 75.4% | 100.0% |
| 3435304 | 376.1.1.52 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM | 0.74 | 50.0 | 4.76e-01 | 78.9% | 61.5% |
| 5033522 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 55.0 | 5.87e-01 | 82.5% | 92.0% |
| 3799902 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.71 | 45.0 | 4.95e-01 | 73.7% | 82.2% |
| 3732738 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 51.0 | 5.10e-01 | 80.7% | 73.3% |
| 4015300 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 61.0 | 5.30e-01 | 98.2% | 85.9% |
| 5049855 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 45.0 | 4.51e-01 | 73.7% | 68.3% |
| 4940846 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 44.0 | 4.44e-01 | 71.9% | 71.2% |
| 5019399 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.63 | 46.0 | 4.67e-01 | 77.2% | 100.0% |
| 3385531 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.61 | 41.0 | 4.51e-01 | 71.9% | 88.9% |
| 4562058 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.61 | 40.0 | 4.38e-01 | 70.2% | 86.7% |
| 3300469 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.57 | 37.0 | 3.90e-01 | 73.7% | 78.0% |
| 3262764 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.55 | 36.0 | 2.50e-01 | 71.9% | 18.1% |
| 5031930 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.55 | 36.0 | 4.06e-01 | 70.2% | 100.0% |
| 5071141 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.54 | 37.0 | 4.03e-01 | 71.9% | 93.3% |
| 869515 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.53 | 45.0 | 2.84e-01 | 100.0% | 45.5% |