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IMGVR_UViG_3300033153_003603-3300033153-Ga0366824_10484416

Arc-Vir

IMGVR_UViG_3300033153_003603-3300033153-Ga0366824_10484416

Quality

76.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 20-84_202-229_295-304
PDB
D2 medium residues 85-201_337-362
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kdrA02 3.40.140.120 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › 0.79 61.0 6.45e-01 100.0% 90.6%
1kbaA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.56 27.0 3.60e-01 71.3% 93.9%
2n99A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.51 26.0 3.36e-01 74.8% 88.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942943 4056.1.1.1 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 0.73 57.0 4.67e-01 81.8% 68.2%
4534824 382.1.1.7 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type 0.56 29.0 3.51e-01 76.9% 77.6%
3185377 228.1.1.1 a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.54 46.0 4.28e-01 93.7% 97.8%
3924816 859.1.1.0 a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.50 29.0 2.88e-01 83.2% 52.7%
D3 medium residues 230-294
PDB