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IMGVR_UViG_3300033153_003603-3300033153-Ga0366824_10484416
Arc-VirIMGVR_UViG_3300033153_003603-3300033153-Ga0366824_10484416
Identity
- Kingdom:
- archaea
Quality
76.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-84_202-229_295-304
D2
medium
residues 85-201_337-362
Domain cluster:
rep: KC821618.1__AGO48403.1__Phi10-1_gp062__00062__D33-74_121-234_364-393
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.79 | 61.0 | 6.45e-01 | 100.0% | 90.6% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 27.0 | 3.60e-01 | 71.3% | 93.9% |
| 2n99A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 26.0 | 3.36e-01 | 74.8% | 88.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942943 | 4056.1.1.1 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 | 0.73 | 57.0 | 4.67e-01 | 81.8% | 68.2% |
| 4534824 | 382.1.1.7 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type | 0.56 | 29.0 | 3.51e-01 | 76.9% | 77.6% |
| 3185377 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.54 | 46.0 | 4.28e-01 | 93.7% | 97.8% |
| 3924816 | 859.1.1.0 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 | 0.50 | 29.0 | 2.88e-01 | 83.2% | 52.7% |
D3
medium
residues 230-294