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IMGVR_UViG_3300033153_004081-3300033153-Ga0366824_10512073

Arc-Vir

IMGVR_UViG_3300033153_004081-3300033153-Ga0366824_10512073

Quality

82.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-70
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2od5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 74.0 6.23e-01 100.0% 67.0%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 67.0 5.29e-01 100.0% 50.0%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 66.0 5.38e-01 100.0% 61.8%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.82e-01 100.0% 81.2%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.77e-01 100.0% 71.8%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.76e-01 100.0% 73.3%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.42e-01 100.0% 63.5%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.34e-01 100.0% 68.1%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 5.06e-01 100.0% 57.3%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.27e-01 100.0% 63.5%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.79e-01 100.0% 84.4%
2mbfA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.09e-01 100.0% 68.0%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.22e-01 100.0% 59.8%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.93e-01 100.0% 57.5%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 5.30e-01 100.0% 75.8%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.61e-01 100.0% 78.9%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.06e-01 100.0% 35.9%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.78e-01 100.0% 59.6%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.57e-01 100.0% 62.3%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.91e-01 100.0% 72.3%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 55.0 4.86e-01 100.0% 67.9%
1dp7P00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.89e-01 100.0% 84.2%
1aoyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.67e-01 100.0% 67.9%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 5.13e-01 100.0% 96.5%
3mcpA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 43.0 2.88e-01 80.0% 92.5%
2pbiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.08e-01 100.0% 73.1%
1a3gA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.56 46.0 3.53e-01 94.5% 73.3%
2r2iA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 48.0 4.22e-01 100.0% 64.4%
1tuzA00 1.10.238.110 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Diacylglycerol kinase alpha. 0.56 46.0 3.74e-01 100.0% 55.9%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.99e-01 100.0% 82.4%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.55 44.0 4.06e-01 100.0% 67.1%
7jptA05 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 44.0 3.38e-01 100.0% 87.0%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 44.0 3.03e-01 100.0% 33.7%
3tzyA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.51 31.0 2.97e-01 100.0% 47.1%
1nndA01 3.10.10.10 Alpha Beta › Roll › HIV Type 1 Reverse Transcriptase; Chain A, domain 1 › HIV Type 1 Reverse Transcriptase, subunit A, domain 1 0.51 34.0 2.89e-01 87.3% 41.3%
4ig1A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.51 39.0 2.41e-01 85.5% 72.6%
1gcyA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 35.0 3.55e-01 98.2% 73.2%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5062643 101.1.2.138 alpha arrays › HTH › HTH › winged helix domain › DUF3860 0.82 75.0 6.54e-01 100.0% 80.0%
4943320 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 69.0 5.32e-01 100.0% 45.8%
4978424 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.78 69.0 5.33e-01 100.0% 50.0%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 68.0 4.88e-01 100.0% 37.5%
5035624 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.76 67.0 5.82e-01 100.0% 65.9%
4950756 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 63.0 5.48e-01 100.0% 60.0%
5064203 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 67.0 5.67e-01 100.0% 63.3%
5028531 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 66.0 5.65e-01 100.0% 61.1%
3623089 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.75 67.0 4.88e-01 100.0% 42.1%
5035522 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 65.0 5.31e-01 100.0% 55.2%
4251909 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 64.0 5.61e-01 100.0% 63.5%
5031078 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 65.0 5.31e-01 100.0% 54.0%
4958040 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.74 66.0 5.50e-01 100.0% 60.0%
4990701 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 65.0 4.97e-01 100.0% 43.8%
4963095 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 64.0 5.16e-01 100.0% 49.5%
4986510 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 66.0 4.79e-01 100.0% 36.7%
3940323 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 5.45e-01 100.0% 71.6%
3173225 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.74 66.0 4.91e-01 100.0% 45.2%
3580334 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.74 63.0 5.61e-01 98.2% 75.0%
5045822 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 4.67e-01 98.2% 42.6%
None 0.74 66.0 5.59e-01 100.0% 71.1%
4999149 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.74 65.0 4.83e-01 100.0% 39.3%
3738668 101.1.2.77 alpha arrays › HTH › HTH › winged helix domain › ESCRT-II 0.74 64.0 5.82e-01 100.0% 72.0%
5021360 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.74 65.0 5.54e-01 100.0% 62.9%
5029803 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 4.94e-01 100.0% 46.2%
4939140 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.73 66.0 6.06e-01 100.0% 78.6%
5045969 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 65.0 5.40e-01 100.0% 58.9%
4960424 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 66.0 6.23e-01 100.0% 84.6%
5004231 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.73 64.0 5.39e-01 100.0% 57.9%
4964386 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 63.0 5.26e-01 100.0% 56.8%
5061675 101.1.2.214 alpha arrays › HTH › HTH › winged helix domain › DnaD_N 0.73 61.0 5.94e-01 100.0% 85.0%
4400884 101.1.2.59 alpha arrays › HTH › HTH › winged helix domain › DUF480 0.73 65.0 4.94e-01 100.0% 44.8%
4937876 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 64.0 4.91e-01 100.0% 44.0%
5030252 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 62.0 5.15e-01 100.0% 54.0%
4969546 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 64.0 5.65e-01 100.0% 68.8%
3167236 148.1.3.31 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM4_WHD 0.72 62.0 5.44e-01 100.0% 65.9%
4985744 101.1.2.901 alpha arrays › HTH › HTH › winged helix domain › HTH_28 0.72 65.0 5.83e-01 100.0% 73.3%
3213400 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.72 61.0 4.63e-01 100.0% 70.7%
3666427 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.72 62.0 4.55e-01 100.0% 36.1%
3630104 192.24.1.6 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.72 62.0 3.75e-01 100.0% 16.6%
3786852 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.72 63.0 5.47e-01 100.0% 70.6%
3515356 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 62.0 5.65e-01 100.0% 80.0%
5080548 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 5.53e-01 96.4% 73.3%
5076521 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.71 62.0 4.76e-01 100.0% 42.3%
4982834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 57.0 5.04e-01 98.2% 61.3%
4947811 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 60.0 4.78e-01 100.0% 46.1%
1284299 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.71 62.0 4.51e-01 100.0% 35.5%
4940569 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.71e-01 100.0% 77.1%
5058268 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.71 61.0 4.88e-01 100.0% 48.7%
3988732 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 61.0 4.97e-01 100.0% 51.9%
4930418 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.70 61.0 5.14e-01 100.0% 61.1%
4229465 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.41e-01 100.0% 70.0%
3501315 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.70 60.0 4.95e-01 100.0% 53.0%
3515049 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.69 59.0 4.49e-01 100.0% 66.4%
5070343 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 5.14e-01 100.0% 63.3%
4975130 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.69 60.0 5.08e-01 100.0% 60.0%
4969624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 60.0 5.57e-01 100.0% 81.4%
4638765 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.69 56.0 4.25e-01 100.0% 36.7%
3439642 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 4.44e-01 100.0% 40.7%
4974951 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 58.0 4.93e-01 100.0% 60.0%
3786459 101.1.2.53 alpha arrays › HTH › HTH › winged helix domain › Mnd1 0.68 54.0 4.16e-01 100.0% 36.4%
4948272 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.68 59.0 5.22e-01 100.0% 66.3%
4931659 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 55.0 4.84e-01 100.0% 60.0%
5049974 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 3.84e-01 100.0% 23.5%
3473498 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 56.0 5.00e-01 100.0% 70.6%
3332258 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 57.0 4.45e-01 100.0% 44.8%
3688358 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.67 55.0 5.03e-01 100.0% 77.5%
4938040 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 55.0 4.15e-01 100.0% 36.0%
3978394 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 57.0 5.48e-01 100.0% 86.2%
3440580 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.66 57.0 4.35e-01 100.0% 42.2%
5047445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 4.45e-01 100.0% 45.0%
2600 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.66 53.0 3.93e-01 100.0% 33.1%
5026287 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.65 54.0 4.56e-01 100.0% 54.7%
3729476 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.65 54.0 4.40e-01 100.0% 56.5%
5052081 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 53.0 3.89e-01 100.0% 32.1%
3621166 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 56.0 4.72e-01 100.0% 58.9%
3257655 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 54.0 4.86e-01 100.0% 69.3%
3250569 101.1.2.151 alpha arrays › HTH › HTH › winged helix domain › COR 0.60 48.0 4.54e-01 100.0% 80.0%
3979999 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.60 47.0 4.03e-01 100.0% 50.5%
4648749 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.59 48.0 3.90e-01 100.0% 49.2%
3781143 4012.4.1.0 a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain 0.58 41.0 4.34e-01 96.4% 93.3%
3842720 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.29e-01 100.0% 76.2%
3829091 387.1.5.19 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Defensin 0.56 37.0 4.00e-01 100.0% 84.4%
4491533 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.55 39.0 3.77e-01 98.2% 66.2%