←Back to structures
IMGVR_UViG_3300033153_012907-3300033153-Ga0366824_10280812
Arc-VirIMGVR_UViG_3300033153_012907-3300033153-Ga0366824_10280812
Identity
- Kingdom:
- archaea
Quality
72.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.80 | 69.0 | 5.77e-01 | 100.0% | 58.8% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.79 | 69.0 | 5.81e-01 | 100.0% | 58.5% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.79 | 68.0 | 6.15e-01 | 100.0% | 77.9% |
| 2a2cA03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.76 | 67.0 | 4.81e-01 | 100.0% | 96.4% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.75 | 63.0 | 5.55e-01 | 100.0% | 66.2% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.73 | 54.0 | 5.02e-01 | 83.3% | 98.4% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 60.0 | 5.26e-01 | 91.7% | 85.9% |
| 2mpnA00 | 6.10.140.1340 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 62.0 | 5.52e-01 | 95.8% | 91.2% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.72 | 58.0 | 5.67e-01 | 91.7% | 82.7% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 60.0 | 5.28e-01 | 100.0% | 94.8% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 54.0 | 5.04e-01 | 91.7% | 64.5% |
| 6n7pX01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 59.0 | 3.62e-01 | 97.9% | 23.4% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.68 | 56.0 | 4.22e-01 | 100.0% | 36.8% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 58.0 | 5.32e-01 | 97.9% | 87.5% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.68 | 55.0 | 4.12e-01 | 97.9% | 38.1% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 55.0 | 5.20e-01 | 97.9% | 77.4% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 52.0 | 4.54e-01 | 85.4% | 57.5% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 57.0 | 4.91e-01 | 100.0% | 80.2% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.67 | 49.0 | 4.87e-01 | 91.7% | 76.9% |
| 2ot4A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.67 | 58.0 | 4.52e-01 | 100.0% | 44.9% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 55.0 | 5.17e-01 | 100.0% | 100.0% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.66 | 54.0 | 5.05e-01 | 97.9% | 73.4% |
| 1vibA00 | 1.10.287.120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Neurotoxin B-IV-like | 0.66 | 55.0 | 5.37e-01 | 100.0% | 87.3% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 54.0 | 4.31e-01 | 97.9% | 53.8% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.63 | 51.0 | 4.50e-01 | 97.9% | 63.3% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.62 | 47.0 | 4.51e-01 | 87.5% | 71.4% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 49.0 | 4.66e-01 | 100.0% | 78.1% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.61 | 51.0 | 4.42e-01 | 100.0% | 61.7% |
| 4od8D00 | 6.10.140.1880 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 45.0 | 4.49e-01 | 81.2% | 84.3% |
| 1yzmA00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.60 | 47.0 | 4.78e-01 | 89.6% | 95.7% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 46.0 | 3.65e-01 | 100.0% | 37.7% |
| 1vw4T02 | 6.10.140.1190 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 40.0 | 4.00e-01 | 75.0% | 68.6% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 47.0 | 4.31e-01 | 100.0% | 74.6% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 44.0 | 3.99e-01 | 91.7% | 63.0% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 45.0 | 4.04e-01 | 100.0% | 64.1% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 44.0 | 3.96e-01 | 97.9% | 85.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4365052 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.80 | 69.0 | 5.58e-01 | 100.0% | 52.6% |
| 4051415 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.80 | 69.0 | 5.74e-01 | 100.0% | 57.6% |
| 4107823 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.80 | 68.0 | 5.43e-01 | 100.0% | 50.0% |
| 4230185 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.78 | 67.0 | 5.65e-01 | 100.0% | 57.1% |
| 4180835 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.78 | 66.0 | 5.95e-01 | 100.0% | 71.4% |
| 3470858 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.77 | 66.0 | 5.34e-01 | 100.0% | 64.2% |
| 4944477 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 62.0 | 4.29e-01 | 100.0% | 27.0% |
| 3618651 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.75 | 60.0 | 4.91e-01 | 91.7% | 49.4% |
| 4942772 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.73 | 56.0 | 5.10e-01 | 85.4% | 64.6% |
| 4870242 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.72 | 62.0 | 4.56e-01 | 100.0% | 72.5% |
| 3515029 | 223.2.1.46 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, FNIP_M | 0.72 | 61.0 | 4.36e-01 | 100.0% | 32.0% |
| 5057549 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 60.0 | 4.45e-01 | 91.7% | 39.0% |
| 4935077 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.71 | 58.0 | 5.16e-01 | 100.0% | 96.0% |
| 58582 | 605.2.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › SSV1_D-63 | 0.69 | 59.0 | 5.71e-01 | 97.9% | 85.5% |
| 3583647 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 52.0 | 4.54e-01 | 85.4% | 53.3% |
| 60297 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.66 | 55.0 | 4.91e-01 | 100.0% | 68.0% |
| 5045370 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.66 | 53.0 | 5.02e-01 | 95.8% | 85.0% |
| 4996523 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.57 | 45.0 | 3.12e-01 | 97.9% | 32.5% |