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IMGVR_UViG_3300033153_012907-3300033153-Ga0366824_102808142
Arc-VirIMGVR_UViG_3300033153_012907-3300033153-Ga0366824_102808142
Identity
- Kingdom:
- archaea
Quality
74.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-60
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1aisA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.86 | 45.0 | 3.61e-01 | 95.7% | 28.7% |
| 1rxqD00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.68 | 58.0 | 3.92e-01 | 95.7% | 55.6% |
| 4ipeB02 | 3.30.230.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.66 | 51.0 | 3.54e-01 | 100.0% | 24.2% |
| 3vusB00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.64 | 54.0 | 3.35e-01 | 100.0% | 17.2% |
| 1iq8A03 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.58 | 41.0 | 3.69e-01 | 80.9% | 62.2% |
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.58 | 49.0 | 3.33e-01 | 95.7% | 96.5% |
| 2fji101 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.57 | 49.0 | 3.22e-01 | 100.0% | 23.9% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 40.0 | 2.99e-01 | 78.7% | 91.2% |
| 2x7fC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 37.0 | 3.02e-01 | 70.2% | 69.1% |
| 1ijyA00 | 1.10.2000.10 | Mainly Alpha › Orthogonal Bundle › Frizzled cysteine-rich domain › Frizzled cysteine-rich domain | 0.55 | 39.0 | 3.05e-01 | 93.6% | 31.1% |
| 2vugA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.55 | 41.0 | 3.28e-01 | 85.1% | 59.8% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 33.0 | 3.71e-01 | 74.5% | 85.3% |
| 3m1gA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 38.0 | 3.02e-01 | 93.6% | 61.9% |
| 4kh7B01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 36.0 | 3.17e-01 | 87.2% | 93.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3717387 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.79 | 50.0 | 3.14e-01 | 100.0% | 13.5% |
| 4961506 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 62.0 | 4.06e-01 | 100.0% | 33.0% |
| 3802266 | 605.1.1.85 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › XH | 0.71 | 58.0 | 4.07e-01 | 95.7% | 29.0% |
| 4972215 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 59.0 | 3.91e-01 | 100.0% | 22.4% |
| 3936432 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 60.0 | 3.88e-01 | 100.0% | 22.4% |
| 3896583 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.64 | 59.0 | 3.90e-01 | 100.0% | 28.6% |
| None | — | 0.62 | 43.0 | 4.04e-01 | 74.5% | 93.3% | |
| 3471264 | 375.10.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf_DPOE_2 | 0.61 | 52.0 | 4.40e-01 | 97.9% | 77.5% |
| 3633782 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 43.0 | 3.93e-01 | 78.7% | 93.8% |
| 3658440 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.60 | 44.0 | 4.19e-01 | 78.7% | 74.5% |
| 3415237 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 53.0 | 3.41e-01 | 100.0% | 25.1% |
| 3805637 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.57 | 35.0 | 2.96e-01 | 78.7% | 33.8% |
| 3607612 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.57 | 38.0 | 3.39e-01 | 70.2% | 100.0% |
| 3527479 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.56 | 37.0 | 3.95e-01 | 72.3% | 91.4% |
| 3780079 | 922.1.1.7 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_ADAMTS | 0.55 | 37.0 | 3.72e-01 | 70.2% | 84.0% |
| 5072382 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 41.0 | 3.31e-01 | 85.1% | 43.7% |
| 3434453 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.53 | 36.0 | 3.75e-01 | 72.3% | 94.7% |
| 3551331 | 633.29.1.8 ↗ | alpha bundles › Bromodomain-like › Putative uncharacterized protein PAV1-137 › Putative uncharacterized protein PAV1-137 › WAC_Acf1_DNA_bd | 0.52 | 43.0 | 3.56e-01 | 89.4% | 97.5% |