←Back to structures
IMGVR_UViG_3300033153_012907-3300033153-Ga0366824_102808157
Arc-VirIMGVR_UViG_3300033153_012907-3300033153-Ga0366824_102808157
Identity
- Kingdom:
- archaea
Quality
75.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-74
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.60 | 49.0 | 4.83e-01 | 98.6% | 87.8% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 37.0 | 3.81e-01 | 72.5% | 100.0% |
| 1rykA00 | 1.10.1470.10 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ | 0.53 | 38.0 | 3.83e-01 | 75.4% | 97.1% |
| 3bemB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.53 | 44.0 | 3.14e-01 | 92.8% | 56.0% |
D2
high
residues 84-181
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.82 | 56.0 | 6.33e-01 | 85.7% | 90.8% |
| 2xglA00 | 3.10.450.300 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein | 0.74 | 57.0 | 5.95e-01 | 81.6% | 87.9% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.73 | 54.0 | 5.72e-01 | 85.7% | 87.4% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 47.0 | 5.12e-01 | 86.7% | 80.2% |
| 3sxxC01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 58.0 | 5.75e-01 | 88.8% | 82.4% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.71 | 56.0 | 5.19e-01 | 84.7% | 86.2% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 45.0 | 5.17e-01 | 85.7% | 90.1% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 57.0 | 5.72e-01 | 88.8% | 88.1% |
| 6grrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 54.0 | 5.40e-01 | 87.8% | 82.2% |
| 2qguA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 54.0 | 5.36e-01 | 83.7% | 98.0% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 50.0 | 5.25e-01 | 86.7% | 89.7% |
| 5tf2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 58.0 | 3.98e-01 | 96.9% | 30.2% |
| 1ksiA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 51.0 | 5.20e-01 | 87.8% | 92.7% |
| 2l4vA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 50.0 | 4.54e-01 | 86.7% | 71.9% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 49.0 | 3.36e-01 | 99.0% | 25.0% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 49.0 | 4.72e-01 | 85.7% | 93.8% |
| 4lmiB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 49.0 | 4.42e-01 | 86.7% | 91.2% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 49.0 | 4.74e-01 | 86.7% | 99.1% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 42.0 | 3.62e-01 | 70.4% | 86.3% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.61 | 48.0 | 3.79e-01 | 82.7% | 42.6% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 47.0 | 4.54e-01 | 82.7% | 95.4% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 47.0 | 4.27e-01 | 85.7% | 80.3% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.58 | 51.0 | 4.69e-01 | 96.9% | 100.0% |
| 2owpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 4.20e-01 | 85.7% | 89.9% |
| 1s1dA00 | 2.120.10.100 | Mainly Beta › 6 Propeller › Neuraminidase › Apyrase | 0.58 | 51.0 | 3.60e-01 | 98.0% | 34.4% |
| 5kkuD00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.57 | 41.0 | 2.95e-01 | 74.5% | 97.5% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 51.0 | 3.49e-01 | 98.0% | 34.3% |
| 1yr2A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.57 | 52.0 | 3.54e-01 | 99.0% | 51.7% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 44.0 | 4.31e-01 | 85.7% | 91.0% |
| 3cyjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 39.0 | 3.62e-01 | 70.4% | 97.5% |
| 1mkeA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.73e-01 | 79.6% | 63.9% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 48.0 | 4.15e-01 | 95.9% | 78.0% |
| 4pn0C00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.53 | 39.0 | 2.97e-01 | 79.6% | 54.7% |
| 1k5dB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.65e-01 | 85.7% | 70.5% |
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 36.0 | 3.89e-01 | 71.4% | 100.0% |
| 4o4oA00 | 2.40.128.590 | Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain | 0.51 | 44.0 | 3.54e-01 | 95.9% | 51.3% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.50 | 44.0 | 4.07e-01 | 95.9% | 79.8% |
| 1f21A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 36.0 | 3.10e-01 | 74.5% | 94.1% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927236 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.78 | 60.0 | 6.45e-01 | 82.7% | 92.9% |
| 4929282 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.77 | 57.0 | 6.36e-01 | 85.7% | 100.0% |
| 4045121 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.76 | 56.0 | 6.17e-01 | 86.7% | 93.8% |
| 4032717 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.76 | 52.0 | 5.95e-01 | 83.7% | 94.5% |
| 4545039 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.74 | 51.0 | 5.87e-01 | 84.7% | 100.0% |
| 1678533 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.71 | 48.0 | 5.46e-01 | 83.7% | 95.7% |
| 3451758 | 243.5.1.1 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 | 0.69 | 55.0 | 5.44e-01 | 85.7% | 86.7% |
| 3349375 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.67 | 57.0 | 5.12e-01 | 92.9% | 88.9% |
| 3187371 | 243.5.1.1 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 | 0.67 | 54.0 | 5.33e-01 | 86.7% | 87.6% |
| 3184366 | 243.5.1.1 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 | 0.66 | 54.0 | 4.97e-01 | 87.8% | 69.6% |
| 4029311 | 5.1.4.73 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RAB3GAP2_N | 0.66 | 56.0 | 3.83e-01 | 94.9% | 29.2% |
| 3611540 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 60.0 | 3.83e-01 | 100.0% | 32.0% |
| 3192395 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.65 | 52.0 | 5.20e-01 | 87.8% | 93.0% |
| 2644388 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.64 | 50.0 | 4.59e-01 | 84.7% | 86.2% |
| 3248011 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.63 | 54.0 | 3.68e-01 | 98.0% | 27.3% |
| 3785654 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.63 | 54.0 | 3.38e-01 | 92.9% | 40.6% |
| 3781523 | 243.1.1.42 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MMU163 | 0.63 | 49.0 | 4.36e-01 | 84.7% | 88.1% |
| 1949057 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.63 | 50.0 | 4.66e-01 | 85.7% | 86.9% |
| 6395 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.62 | 49.0 | 4.54e-01 | 86.7% | 83.5% |
| 3305683 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 54.0 | 3.64e-01 | 96.9% | 26.5% |
| 3962383 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.61 | 48.0 | 4.43e-01 | 84.7% | 85.6% |
| 3873394 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.61 | 43.0 | 3.63e-01 | 72.4% | 59.4% |
| 3831586 | 5.1.4.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 | 0.60 | 53.0 | 4.11e-01 | 98.0% | 48.4% |
| 3518065 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.60 | 45.0 | 4.06e-01 | 79.6% | 73.3% |
| 2797459 | 220.1.1.3 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1,Retinal | 0.59 | 42.0 | 4.04e-01 | 73.5% | 80.5% |
| 3274838 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.59 | 41.0 | 3.77e-01 | 84.7% | 54.6% |
| 3742613 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 48.0 | 3.08e-01 | 96.9% | 18.7% |
| 3597662 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 53.0 | 3.46e-01 | 98.0% | 28.1% |
| 3275356 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 51.0 | 3.35e-01 | 96.9% | 24.3% |
| 3623481 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.58 | 44.0 | 3.55e-01 | 82.7% | 43.3% |
| 4991720 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.58 | 42.0 | 3.88e-01 | 95.9% | 60.0% |
| 5025792 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.57 | 43.0 | 4.09e-01 | 95.9% | 67.8% |
| 3506373 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.56 | 47.0 | 4.21e-01 | 89.8% | 74.1% |
| 3650512 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 50.0 | 3.49e-01 | 99.0% | 31.5% |
| 4613375 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.56 | 40.0 | 3.16e-01 | 75.5% | 93.7% |
| 3543955 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.55 | 47.0 | 3.45e-01 | 94.9% | 43.3% |
| 1349153 | 5.1.11.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A | 0.55 | 48.0 | 3.09e-01 | 98.0% | 28.7% |
| 4030715 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.55 | 44.0 | 3.97e-01 | 84.7% | 76.9% |
| 3730739 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.54 | 47.0 | 4.22e-01 | 94.9% | 83.5% |
| 3196743 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.53 | 43.0 | 3.98e-01 | 87.8% | 76.4% |
| 3251868 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.53 | 38.0 | 3.36e-01 | 74.5% | 95.0% |
| 3496977 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 42.0 | 3.93e-01 | 86.7% | 80.0% |
| 3497957 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.53 | 42.0 | 3.53e-01 | 85.7% | 61.2% |
| 3923150 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.52 | 43.0 | 3.96e-01 | 87.8% | 83.2% |
| 5040847 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 47.0 | 3.34e-01 | 99.0% | 51.9% |
| 3925291 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.52 | 42.0 | 3.85e-01 | 87.8% | 75.4% |
| 3673362 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.52 | 42.0 | 3.57e-01 | 86.7% | 71.9% |
| 3482605 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 42.0 | 4.03e-01 | 86.7% | 93.6% |
| 3547482 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.51 | 42.0 | 3.53e-01 | 89.8% | 59.4% |
| 3474366 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.51 | 41.0 | 3.65e-01 | 87.8% | 72.9% |