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IMGVR_UViG_3300033153_015493-3300033153-Ga0366824_101405734
Arc-VirIMGVR_UViG_3300033153_015493-3300033153-Ga0366824_101405734
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-182
Domain cluster:
rep: MK170447__AZF89918.1__X__00084__D3-182
D2
high
residues 185-314
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d0qA00 | 3.90.580.10 | Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain | 0.68 | 47.0 | 5.21e-01 | 83.1% | 89.2% |
| 3k8rA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.51 | 27.0 | 3.52e-01 | 83.1% | 97.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940785 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 62.0 | 6.60e-01 | 88.5% | 95.7% |
| 4166935 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.72 | 48.0 | 5.42e-01 | 80.8% | 88.0% |
| 4539347 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.70 | 46.0 | 5.18e-01 | 80.0% | 87.0% |
| 4680318 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.70 | 46.0 | 5.34e-01 | 80.8% | 95.6% |
| 3590274 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 45.0 | 5.32e-01 | 79.2% | 97.8% |
| 5003468 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.67 | 47.0 | 5.16e-01 | 78.5% | 89.5% |
| 4639076 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 43.0 | 4.95e-01 | 80.8% | 89.5% |
| 3260512 | 386.1.1.71 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 | 0.60 | 28.0 | 3.94e-01 | 91.5% | 100.0% |
| 3389846 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 27.0 | 3.54e-01 | 94.6% | 86.2% |
| 3808970 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 18.0 | 2.81e-01 | 72.3% | 68.0% |
| 3537747 | 386.1.1.71 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 | 0.55 | 26.0 | 3.56e-01 | 87.7% | 98.2% |
| 4996022 | 3006.1.1.1 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Lsm_C | 0.55 | 29.0 | 3.87e-01 | 70.8% | 100.0% |
| 3706881 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.55 | 26.0 | 3.19e-01 | 76.9% | 67.1% |
| 3335828 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 37.0 | 4.16e-01 | 96.2% | 94.7% |
| 3768845 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.52 | 30.0 | 3.30e-01 | 83.1% | 70.5% |
| 4995759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 32.0 | 3.80e-01 | 70.8% | 100.0% |
D3
high
residues 325-424
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 38.0 | 4.95e-01 | 80.0% | 86.4% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 41.0 | 3.97e-01 | 81.0% | 50.5% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 41.0 | 4.09e-01 | 86.0% | 56.4% |
| 2xgsB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 38.0 | 4.45e-01 | 87.0% | 74.0% |
| 1wy6A00 | 1.25.40.350 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 43.0 | 3.63e-01 | 86.0% | 39.6% |
| 4nrhB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 41.0 | 3.38e-01 | 87.0% | 35.9% |
| 3sz7A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 40.0 | 3.50e-01 | 87.0% | 40.4% |
| 3k9iA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 40.0 | 4.04e-01 | 86.0% | 59.2% |
| 3qdnA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 37.0 | 4.05e-01 | 84.0% | 65.5% |
| 2ho1B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 39.0 | 2.99e-01 | 87.0% | 26.2% |
| 5fzsA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 40.0 | 3.95e-01 | 87.0% | 57.0% |
| 3urzA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 43.0 | 3.40e-01 | 96.0% | 32.7% |
| 1dt9A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.65 | 37.0 | 3.59e-01 | 92.0% | 50.0% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.64 | 42.0 | 4.85e-01 | 90.0% | 90.5% |
| 4xi0F00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 39.0 | 3.20e-01 | 87.0% | 34.3% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 39.0 | 4.40e-01 | 83.0% | 81.3% |
| 5g05P02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 38.0 | 2.98e-01 | 87.0% | 29.9% |
| 7ru9C01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 46.0 | 3.31e-01 | 95.0% | 28.8% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.61 | 45.0 | 4.53e-01 | 96.0% | 77.2% |
| 3agkA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.60 | 40.0 | 3.75e-01 | 90.0% | 54.8% |
| 3jz0A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.57 | 44.0 | 4.06e-01 | 82.0% | 63.1% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.57 | 39.0 | 4.00e-01 | 83.0% | 72.2% |
| 3ceqA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 46.0 | 3.39e-01 | 87.0% | 35.2% |
| 2hr2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 40.0 | 3.43e-01 | 86.0% | 47.4% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.55 | 31.0 | 3.45e-01 | 87.0% | 68.8% |
| 3c19A02 | 3.10.20.300 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain | 0.54 | 32.0 | 3.55e-01 | 85.0% | 74.4% |
| 3c18A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 43.0 | 4.07e-01 | 86.0% | 71.2% |
| 3x3nA04 | 2.40.50.910 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Type VII secretion system EccB, repeat 3 domain | 0.53 | 35.0 | 3.67e-01 | 96.0% | 74.2% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 39.0 | 3.65e-01 | 80.0% | 60.5% |
| 3v0aB04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 37.0 | 3.28e-01 | 73.0% | 86.5% |
| 2q00B00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 43.0 | 4.04e-01 | 86.0% | 89.3% |
| 4gywA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 38.0 | 3.79e-01 | 98.0% | 71.4% |
| 2ifuD00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 48.0 | 3.50e-01 | 100.0% | 39.3% |
| 1tmoA03 | 3.90.55.10 | Alpha Beta › Alpha-Beta Complex › Dimethylsulfoxide Reductase; domain 3 › Dimethylsulfoxide Reductase, domain 3 | 0.53 | 28.0 | 2.97e-01 | 89.0% | 57.0% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 45.0 | 3.37e-01 | 100.0% | 53.9% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.51 | 36.0 | 3.65e-01 | 94.0% | 74.7% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.50 | 34.0 | 3.22e-01 | 85.0% | 55.6% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003620 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.90 | 74.0 | 4.89e-01 | 91.0% | 25.4% |
| 3840125 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 39.0 | 3.91e-01 | 82.0% | 49.5% |
| 3655717 | 109.4.1.1146 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_PUB | 0.66 | 43.0 | 3.26e-01 | 90.0% | 29.3% |
| 4447447 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 36.0 | 3.63e-01 | 79.0% | 53.0% |
| 3639192 | 109.4.1.2839 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_14, TPR_19, PF29376 | 0.62 | 39.0 | 2.86e-01 | 89.0% | 24.2% |
| 4001707 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.59 | 38.0 | 4.11e-01 | 88.0% | 77.6% |
| 5041570 | 3859.1.1.0 ↗ | alpha arrays › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain | 0.58 | 42.0 | 3.97e-01 | 76.0% | 63.2% |
| 3806737 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.57 | 45.0 | 4.02e-01 | 83.0% | 71.4% |
| 3284448 | 873.1.1.7 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd | 0.55 | 49.0 | 3.96e-01 | 99.0% | 100.0% |
| 3701494 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 48.0 | 3.59e-01 | 97.0% | 71.9% |
| 3924728 | 386.1.1.251 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7381 | 0.55 | 31.0 | 3.47e-01 | 76.0% | 72.0% |
| 3444267 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 40.0 | 3.36e-01 | 86.0% | 47.3% |
| 3972594 | 3714.1.1.1 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical | 0.53 | 38.0 | 2.84e-01 | 74.0% | 60.0% |
| 4022896 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.52e-01 | 86.0% | 56.2% |
| 4976626 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.53 | 39.0 | 3.05e-01 | 79.0% | 76.4% |
| 3699931 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.52 | 40.0 | 3.29e-01 | 81.0% | 52.2% |
| 3661553 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.52 | 39.0 | 4.11e-01 | 81.0% | 86.7% |
| 3715945 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 3.01e-01 | 98.0% | 47.7% |
| 3167157 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 42.0 | 3.65e-01 | 98.0% | 57.4% |
| 4970595 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.51 | 40.0 | 3.03e-01 | 86.0% | 60.0% |
| 4295958 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 41.0 | 3.26e-01 | 87.0% | 90.5% |
| 3573636 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 45.0 | 2.77e-01 | 100.0% | 19.1% |
D4
high
residues 698-783
Domain cluster:
rep: IMGVR_UViG_3300033781_000034-3300033781-Ga0326759_00004_125332_128028__D740-834
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dp7P00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 67.0 | 7.07e-01 | 87.2% | 100.0% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.69 | 54.0 | 5.58e-01 | 83.7% | 95.0% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 5.17e-01 | 84.9% | 79.8% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 4.63e-01 | 84.9% | 64.0% |
| 4rayA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 48.0 | 4.89e-01 | 84.9% | 78.8% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 4.50e-01 | 87.2% | 60.7% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 48.0 | 5.03e-01 | 86.0% | 85.7% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.64e-01 | 86.0% | 65.0% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.67e-01 | 86.0% | 64.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 50.0 | 4.69e-01 | 86.0% | 67.6% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 52.0 | 5.35e-01 | 94.2% | 93.8% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 52.0 | 4.96e-01 | 87.2% | 81.6% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 44.0 | 4.17e-01 | 86.0% | 60.6% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 53.0 | 5.04e-01 | 91.9% | 79.6% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.51e-01 | 87.2% | 68.9% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 4.61e-01 | 84.9% | 82.9% |
| 2v1xA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 4.32e-01 | 84.9% | 78.2% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 3.96e-01 | 84.9% | 55.8% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 4.40e-01 | 89.5% | 74.8% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 4.15e-01 | 87.2% | 68.6% |
| 3mczA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 45.0 | 3.22e-01 | 86.0% | 35.8% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.71e-01 | 86.0% | 52.1% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.61e-01 | 86.0% | 49.0% |
| 3hnrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 42.0 | 3.25e-01 | 83.7% | 48.7% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.53 | 44.0 | 3.13e-01 | 93.0% | 72.8% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.52 | 36.0 | 3.85e-01 | 86.0% | 88.6% |
| 2cpmA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.51 | 37.0 | 3.62e-01 | 87.2% | 70.2% |
| 3qjlA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.62e-01 | 86.0% | 85.7% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 33.0 | 3.25e-01 | 72.1% | 63.3% |
| 3dh0B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 40.0 | 3.10e-01 | 86.0% | 100.0% |
| 4e2aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 37.0 | 2.99e-01 | 79.1% | 63.5% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003621 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 76.0 | 7.35e-01 | 89.5% | 83.2% |
| 5081315 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 72.0 | 7.68e-01 | 84.9% | 100.0% |
| 4973290 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 68.0 | 7.44e-01 | 84.9% | 100.0% |
| 5022021 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 75.0 | 6.73e-01 | 91.9% | 73.9% |
| 3729476 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.86 | 72.0 | 6.45e-01 | 88.4% | 79.1% |
| 3993626 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.86 | 72.0 | 7.26e-01 | 88.4% | 92.9% |
| 3177239 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.86 | 73.0 | 6.18e-01 | 90.7% | 82.2% |
| 5029778 | 101.1.2.43 ↗ | alpha arrays › HTH › HTH › winged helix domain › Pox_D5 | 0.85 | 76.0 | 7.49e-01 | 94.2% | 95.6% |
| 3898745 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.84 | 74.0 | 7.16e-01 | 94.2% | 91.6% |
| 4012878 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 71.0 | 6.36e-01 | 89.5% | 82.6% |
| 3537242 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.84 | 74.0 | 7.01e-01 | 94.2% | 84.0% |
| 3688358 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.83 | 68.0 | 7.10e-01 | 87.2% | 96.2% |
| 3883278 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.79 | 71.0 | 6.86e-01 | 96.5% | 97.9% |
| 3783974 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.79 | 69.0 | 5.11e-01 | 95.3% | 73.3% |
| 3515356 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 54.0 | 5.68e-01 | 80.2% | 90.7% |
| 5044327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 53.0 | 5.09e-01 | 86.0% | 69.0% |
| 5025840 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 56.0 | 5.39e-01 | 88.4% | 82.0% |
| 3602557 | 101.1.2.143 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_34 | 0.69 | 50.0 | 4.95e-01 | 84.9% | 72.2% |
| 3587554 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 52.0 | 5.02e-01 | 86.0% | 70.0% |
| 4983310 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.69 | 50.0 | 4.82e-01 | 84.9% | 67.0% |
| 3579831 | 101.1.2.188 ↗ | alpha arrays › HTH › HTH › winged helix domain › Roquin_1_2-like_ROQ | 0.67 | 53.0 | 4.79e-01 | 86.0% | 63.3% |
| 4593646 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 52.0 | 5.12e-01 | 88.4% | 78.9% |
| 4946524 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 48.0 | 4.45e-01 | 84.9% | 59.1% |
| 5025451 | 101.1.2.143 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_34 | 0.66 | 48.0 | 4.42e-01 | 84.9% | 59.1% |
| 4999286 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.66 | 51.0 | 4.07e-01 | 84.9% | 40.6% |
| 1146763 | 101.1.2.72 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sulfolobus_pRN | 0.66 | 48.0 | 5.03e-01 | 86.0% | 85.7% |
| 4926994 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.65 | 50.0 | 4.68e-01 | 86.0% | 67.3% |
| 4329890 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.65 | 47.0 | 3.94e-01 | 84.9% | 44.0% |
| 4028966 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 49.0 | 4.86e-01 | 86.0% | 76.7% |
| 5048761 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 45.0 | 4.90e-01 | 84.9% | 90.0% |
| 4948012 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 47.0 | 4.29e-01 | 84.9% | 57.4% |
| 3901483 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 42.0 | 4.74e-01 | 86.0% | 89.2% |
| 4978412 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.64 | 53.0 | 4.27e-01 | 93.0% | 81.7% |
| 3628572 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.63 | 55.0 | 4.88e-01 | 96.5% | 88.8% |
| 3213400 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.63 | 55.0 | 4.70e-01 | 96.5% | 95.7% |
| 5008107 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.63 | 46.0 | 4.30e-01 | 84.9% | 61.9% |
| 4978596 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.63 | 51.0 | 4.57e-01 | 89.5% | 65.6% |
| 4963293 | 101.1.2.921 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7109 | 0.63 | 51.0 | 5.10e-01 | 89.5% | 94.4% |
| 4229465 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 46.0 | 4.80e-01 | 87.2% | 86.3% |
| 3483777 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 44.0 | 4.67e-01 | 87.2% | 85.3% |
| 4965203 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.62 | 44.0 | 4.17e-01 | 86.0% | 60.2% |
| 3463151 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 55.0 | 4.65e-01 | 98.8% | 80.7% |
| 4022000 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.62 | 45.0 | 4.93e-01 | 86.0% | 95.7% |
| 4964272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 44.0 | 4.17e-01 | 84.9% | 61.0% |
| 3688689 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.62 | 54.0 | 4.79e-01 | 100.0% | 91.5% |
| 4945186 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 47.0 | 4.14e-01 | 86.0% | 54.6% |
| 5014176 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 50.0 | 4.11e-01 | 89.5% | 50.6% |
| 3588406 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 4.78e-01 | 81.4% | 100.0% |
| 5042935 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.61 | 43.0 | 4.24e-01 | 84.9% | 68.4% |
| 3204619 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.61 | 48.0 | 4.00e-01 | 86.0% | 64.7% |
| 3694234 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.61 | 47.0 | 3.82e-01 | 84.9% | 47.6% |
| 3443787 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 47.0 | 4.74e-01 | 86.0% | 87.1% |
| 4976218 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.60 | 46.0 | 4.24e-01 | 86.0% | 64.2% |
| 3206556 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.60 | 51.0 | 3.76e-01 | 98.8% | 52.4% |
| 3515049 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.57 | 50.0 | 4.28e-01 | 97.7% | 97.1% |
| 4991130 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 50.0 | 4.40e-01 | 98.8% | 99.2% |
| 1266161 | 2003.1.5.163 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2, Methyltransf_25 | 0.56 | 45.0 | 3.27e-01 | 86.0% | 36.2% |
| 5022274 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.56 | 44.0 | 3.32e-01 | 83.7% | 40.0% |
| 3395407 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.54 | 37.0 | 3.77e-01 | 84.9% | 71.8% |
| 4976807 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.54 | 41.0 | 3.72e-01 | 86.0% | 58.4% |
| 3581967 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.54 | 38.0 | 4.20e-01 | 84.9% | 96.9% |
| 5003842 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.54 | 39.0 | 3.11e-01 | 81.4% | 37.4% |
| 3698585 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.54 | 37.0 | 3.90e-01 | 86.0% | 77.5% |
| 4629764 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 43.0 | 3.19e-01 | 86.0% | 44.3% |
| 3984530 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 40.0 | 3.46e-01 | 81.4% | 62.1% |
| 4008840 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.53 | 41.0 | 3.20e-01 | 83.7% | 47.1% |
| 4967545 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.53 | 41.0 | 3.15e-01 | 83.7% | 46.2% |
| 3738706 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.53 | 42.0 | 3.78e-01 | 86.0% | 85.8% |
| 4224634 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.52 | 42.0 | 3.13e-01 | 86.0% | 44.7% |
| 3543869 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.52 | 36.0 | 3.54e-01 | 86.0% | 65.3% |
| 4132371 | 2003.1.5.152 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CMAS, Methyltransf_25 | 0.52 | 40.0 | 3.02e-01 | 83.7% | 43.3% |
| 4044555 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.52 | 40.0 | 3.04e-01 | 83.7% | 44.4% |
| 5013441 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.52 | 41.0 | 3.15e-01 | 86.0% | 43.5% |
| 4019210 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.51 | 37.0 | 4.05e-01 | 86.0% | 94.3% |
| 4256199 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 39.0 | 2.96e-01 | 83.7% | 40.0% |
| 4676104 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.51 | 39.0 | 2.96e-01 | 82.6% | 43.9% |
| 4993637 | 7516.1.1.23 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF2064 | 0.51 | 37.0 | 2.80e-01 | 81.4% | 68.4% |
| 3411905 | 327.11.2.20 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH | 0.50 | 32.0 | 3.61e-01 | 73.3% | 86.2% |
| 3281049 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.50 | 40.0 | 3.11e-01 | 86.0% | 46.3% |
| 3737998 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.50 | 37.0 | 3.72e-01 | 86.0% | 78.8% |
D5
medium
residues 470-503_648-684
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oyyA00 | 6.10.80.10 | Special › Helix non-globular › DNA polymerase; domain 1 › Hexameric tyrosine-coordinated heme protein (HTHP) | 0.67 | 43.0 | 4.35e-01 | 90.1% | 66.2% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.58 | 38.0 | 4.03e-01 | 73.2% | 73.4% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.58 | 38.0 | 3.66e-01 | 73.2% | 59.3% |
| 2iexA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.57 | 32.0 | 3.63e-01 | 76.1% | 74.5% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 38.0 | 3.64e-01 | 73.2% | 59.3% |
| 3u4qA02 | 1.10.274.50 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.57 | 47.0 | 3.78e-01 | 95.8% | 62.7% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 37.0 | 3.58e-01 | 74.6% | 61.5% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.55 | 39.0 | 3.35e-01 | 93.0% | 47.3% |
| 3lvyE01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.54 | 47.0 | 3.58e-01 | 95.8% | 69.1% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.54 | 40.0 | 3.52e-01 | 78.9% | 61.2% |
| 1ikpA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.54 | 48.0 | 3.70e-01 | 100.0% | 63.3% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.54 | 41.0 | 3.94e-01 | 94.4% | 71.1% |
| 2oyoA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.53 | 45.0 | 3.78e-01 | 94.4% | 88.8% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.53 | 48.0 | 2.98e-01 | 100.0% | 66.8% |
| 4bjaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 45.0 | 3.37e-01 | 95.8% | 86.8% |
| 1ac1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 46.0 | 3.35e-01 | 95.8% | 39.4% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 37.0 | 3.93e-01 | 73.2% | 82.5% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.52 | 38.0 | 2.92e-01 | 77.5% | 91.9% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.52 | 40.0 | 3.69e-01 | 97.2% | 64.4% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 44.0 | 3.47e-01 | 95.8% | 78.3% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.51 | 39.0 | 3.23e-01 | 80.3% | 80.0% |
| 1mhyG01 | 1.20.1280.10 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 1 | 0.51 | 42.0 | 4.33e-01 | 94.4% | 95.6% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081314 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.97 | 94.0 | 6.07e-01 | 100.0% | 78.1% |
| 5029777 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.97 | 94.0 | 6.08e-01 | 100.0% | 80.0% |
| 3677894 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.70 | 49.0 | 4.84e-01 | 73.2% | 96.0% |
| 3170639 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.65 | 39.0 | 3.67e-01 | 76.1% | 50.6% |
| 5035458 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.61 | 38.0 | 3.39e-01 | 73.2% | 46.3% |
| 3459964 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.57 | 45.0 | 3.41e-01 | 87.3% | 70.3% |
| 4991822 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.56 | 46.0 | 3.11e-01 | 93.0% | 51.8% |
| 3484228 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.55 | 39.0 | 4.32e-01 | 90.1% | 94.5% |
| 3393201 | 109.27.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK | 0.55 | 44.0 | 3.37e-01 | 85.9% | 51.2% |
| 3222373 | 605.4.1.18 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › PF29357 | 0.54 | 40.0 | 3.72e-01 | 77.5% | 71.8% |
| 4612826 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.52 | 37.0 | 3.56e-01 | 74.6% | 65.0% |
| 3193541 | 3788.1.1.26 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PXA | 0.52 | 37.0 | 3.34e-01 | 73.2% | 65.3% |
| 3768322 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.52 | 36.0 | 3.80e-01 | 73.2% | 93.8% |
| 3626122 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.52 | 36.0 | 3.92e-01 | 73.2% | 90.0% |
| 3845975 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.51 | 36.0 | 3.28e-01 | 74.6% | 81.1% |
| 5052279 | 632.1.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › BE_C | 0.51 | 37.0 | 3.12e-01 | 77.5% | 65.8% |
| 3168656 | 604.5.1.64 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › EMC4 | 0.51 | 43.0 | 3.71e-01 | 93.0% | 79.1% |
| 3596744 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.50 | 36.0 | 3.36e-01 | 87.3% | 61.2% |
| 3832267 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.50 | 37.0 | 3.30e-01 | 77.5% | 68.0% |
D6
medium
residues 504-647
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19263.6 best | DUF5906 | 66.9 | 3.40e-18 | 77.8% | 98.2% |