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IMGVR_UViG_3300033156_001187-3300033156-Ga0366836_10064316

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300033156_001187-3300033156-Ga0366836_10064316 ↗
Kingdom:: archaea

Quality

90.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-67

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2yevC00	6.10.280.110	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.74	53.0	5.34e-01	92.2%	76.2%
3vfzB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.71	50.0	5.12e-01	79.7%	77.8%
1w53A00	1.10.1240.30	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain	0.68	49.0	4.47e-01	75.0%	72.6%
3ljcA02	1.20.58.1480	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.64	59.0	4.56e-01	96.9%	74.6%
2zgyA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.62	49.0	3.94e-01	92.2%	50.0%
2lpbA00	1.10.287.2920	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.59	46.0	4.30e-01	90.6%	67.9%
2jqqA00	1.20.58.1240	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.58	50.0	3.72e-01	93.8%	61.7%
3r84B00	6.10.280.160	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22	0.57	51.0	4.71e-01	100.0%	78.8%
2is9A01	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.56	38.0	3.17e-01	70.3%	43.4%
1sqgA01	1.10.940.10	Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like	0.55	39.0	3.19e-01	79.7%	43.3%
3cqcB01	1.20.58.1380	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	39.0	3.60e-01	85.9%	71.1%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1297277	4016.1.1.1 ↗	alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV	0.81	55.0	3.89e-01	93.8%	24.9%
3860830	2004.1.1.564 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HA2_N, HA2_C	0.73	55.0	3.18e-01	84.4%	8.7%
3765803	4156.1.1.2 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C	0.73	55.0	3.85e-01	84.4%	25.4%
5059486	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.69	57.0	3.82e-01	90.6%	26.3%
1758759	5054.1.1.59 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2	0.67	61.0	4.12e-01	100.0%	36.9%
3213478	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.67	52.0	4.79e-01	85.9%	98.8%
3996708	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.66	62.0	4.78e-01	100.0%	92.3%
4075707	3711.1.1.0 ↗	alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein	0.64	53.0	4.63e-01	90.6%	68.4%
3514933	5069.1.3.62 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Mito_carr	0.58	49.0	3.89e-01	93.8%	49.2%