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IMGVR_UViG_3300033162_000222-3300033162-Ga0334901_1000164117
Arc-VirIMGVR_UViG_3300033162_000222-3300033162-Ga0334901_1000164117
Identity
- Kingdom:
- archaea
Quality
63.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 144-201
D2
medium
residues 8-91_109-141
Domain cluster:
rep: ON014753.1__UQS94880.1__Pam1_60__00060__D11-130_138-150
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 40.6 | 4.10e-10 | 69.2% | 92.9% |
| PF13455.13 | MUG113 | 54.1 | 2.60e-14 | 57.3% | 84.9% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.60 | 29.0 | 3.66e-01 | 74.4% | 77.3% |
| 3da1A03 | 1.10.8.870 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Alpha-glycerophosphate oxidase, cap domain | 0.50 | 35.0 | 3.40e-01 | 93.2% | 62.5% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946107 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.74 | 58.0 | 6.42e-01 | 81.2% | 98.9% |
| 3698242 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.68 | 55.0 | 5.43e-01 | 96.6% | 79.7% |
| 3288892 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.66 | 28.0 | 4.23e-01 | 77.8% | 100.0% |
| 3689357 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.65 | 58.0 | 5.12e-01 | 94.9% | 78.2% |
| 3197583 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.60 | 55.0 | 4.55e-01 | 96.6% | 81.9% |
| 4972049 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.95e-01 | 88.0% | 80.0% |
| 3637444 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 43.0 | 3.44e-01 | 94.0% | 92.2% |
| 3395915 | 302.1.1.3 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › PF29551 | 0.50 | 37.0 | 3.27e-01 | 78.6% | 68.0% |