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IMGVR_UViG_3300033165_000009-3300033165-Ga0334892_10006941
Arc-VirIMGVR_UViG_3300033165_000009-3300033165-Ga0334892_10006941
Identity
- Kingdom:
- archaea
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-40_64-76
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g8jB00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.76 | 51.0 | 3.75e-01 | 75.5% | 28.9% |
| 6klsA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.72 | 43.0 | 3.56e-01 | 75.5% | 34.0% |
| 3d89A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.71 | 51.0 | 3.74e-01 | 75.5% | 36.8% |
| 2b5uA03 | 3.10.380.10 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain | 0.69 | 49.0 | 4.03e-01 | 75.5% | 55.1% |
| 3rlfF02 | 3.10.650.10 | Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like | 0.69 | 48.0 | 4.13e-01 | 75.5% | 47.6% |
| 1ye9A02 | 2.40.470.10 | Mainly Beta › Beta Barrel › catalase hpii fold › catalase hpii domain | 0.63 | 44.0 | 3.53e-01 | 75.5% | 66.1% |
| 2qpzA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 47.0 | 3.78e-01 | 100.0% | 46.6% |
| 3gceA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 49.0 | 3.88e-01 | 100.0% | 48.1% |
| 1x4rA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.54 | 38.0 | 3.40e-01 | 75.5% | 53.2% |
| 5lznA00 | 3.10.20.360 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › CKK domain | 0.54 | 42.0 | 3.36e-01 | 86.8% | 88.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017748 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.79 | 51.0 | 3.91e-01 | 75.5% | 31.8% |
| 4019147 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.76 | 55.0 | 4.10e-01 | 75.5% | 34.2% |
| 4957682 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.76 | 47.0 | 3.76e-01 | 75.5% | 32.0% |
| 8073 | 4294.1.1.3 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske_2 | 0.74 | 52.0 | 5.40e-01 | 73.6% | 79.6% |
| 4210311 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.73 | 49.0 | 3.82e-01 | 75.5% | 34.3% |
| 5043002 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.70 | 38.0 | 4.14e-01 | 75.5% | 62.2% |
| 3910652 | 66.1.1.3 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Sol_Rieske_ferrdox | 0.68 | 47.0 | 3.73e-01 | 75.5% | 35.5% |
| 4125041 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.67 | 33.0 | 3.92e-01 | 98.1% | 68.6% |
| 4954419 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 59.0 | 4.35e-01 | 100.0% | 60.8% |
| 4929178 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.61 | 34.0 | 2.25e-01 | 98.1% | 14.1% |
| 4193681 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.58 | 48.0 | 3.87e-01 | 100.0% | 48.5% |
| 4927827 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.58 | 49.0 | 3.98e-01 | 100.0% | 50.0% |
| 4259152 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.58 | 47.0 | 3.77e-01 | 100.0% | 45.7% |
| 3187588 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.57 | 51.0 | 3.78e-01 | 100.0% | 45.9% |
| 158750 | 4357.1.1.2 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_1 | 0.54 | 38.0 | 3.17e-01 | 75.5% | 42.4% |
| 4958458 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.53 | 48.0 | 3.56e-01 | 100.0% | 60.2% |
| 5000677 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.51 | 39.0 | 3.81e-01 | 84.9% | 76.7% |