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IMGVR_UViG_3300033165_000009-3300033165-Ga0334892_100069418
Arc-VirIMGVR_UViG_3300033165_000009-3300033165-Ga0334892_100069418
Identity
- Kingdom:
- archaea
Quality
71.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-67
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.76 | 56.0 | 4.43e-01 | 76.3% | 48.2% |
| 3h1nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 57.0 | 4.49e-01 | 88.1% | 73.3% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 52.0 | 4.35e-01 | 83.1% | 53.9% |
| 7e84A02 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.68 | 56.0 | 4.28e-01 | 93.2% | 65.5% |
| 2aswA00 | 1.10.8.500 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase | 0.67 | 44.0 | 4.51e-01 | 76.3% | 71.4% |
| 1yq1A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 55.0 | 4.53e-01 | 96.6% | 74.1% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 51.0 | 5.02e-01 | 88.1% | 98.4% |
| 1kz7A01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.63 | 49.0 | 3.48e-01 | 86.4% | 29.0% |
| 7yh2B01 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.62 | 44.0 | 3.31e-01 | 76.3% | 87.3% |
| 3fwbA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 45.0 | 4.09e-01 | 100.0% | 91.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4000502 | 192.8.1.305 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › VPS18_RING_C | 0.70 | 61.0 | 4.97e-01 | 96.6% | 58.2% |
| 3410564 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.70 | 53.0 | 4.07e-01 | 81.4% | 39.2% |
| 3458208 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.67 | 53.0 | 3.72e-01 | 84.7% | 27.8% |
| 3309682 | 159.1.2.2 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG | 0.58 | 44.0 | 3.65e-01 | 84.7% | 57.3% |