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IMGVR_UViG_3300033165_000133-3300033165-Ga0334892_100383315

Arc-Vir

IMGVR_UViG_3300033165_000133-3300033165-Ga0334892_100383315

Quality

83.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-65
PDB
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.82 69.0 6.88e-01 93.0% 87.9%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 63.0 5.86e-01 91.2% 84.7%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.76 68.0 4.99e-01 100.0% 81.5%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.74 66.0 4.85e-01 100.0% 87.4%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 62.0 5.66e-01 93.0% 73.7%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 60.0 5.12e-01 91.2% 59.8%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 54.0 5.79e-01 94.7% 95.8%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.72 65.0 5.89e-01 100.0% 88.3%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 60.0 5.74e-01 94.7% 95.6%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 59.0 5.83e-01 91.2% 90.3%
3meuB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.42e-01 93.0% 77.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.94e-01 96.5% 88.7%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 5.44e-01 93.0% 83.8%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.69 50.0 3.23e-01 77.2% 45.0%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.68 52.0 3.36e-01 86.0% 28.2%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 4.80e-01 100.0% 67.3%
3kstA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 52.0 3.30e-01 86.0% 29.2%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 52.0 5.39e-01 86.0% 94.4%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.92e-01 91.2% 93.6%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 53.0 5.08e-01 93.0% 94.0%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.65 56.0 3.90e-01 100.0% 32.7%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 49.0 4.13e-01 87.7% 85.3%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 48.0 4.08e-01 84.2% 93.1%
6krwA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.64 46.0 2.94e-01 77.2% 42.4%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 50.0 3.25e-01 87.7% 29.8%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.63 49.0 4.85e-01 87.7% 82.0%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 4.83e-01 100.0% 71.1%
1bf5A04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 46.0 3.74e-01 80.7% 66.4%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 4.86e-01 93.0% 84.8%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 3.93e-01 87.7% 59.1%
1jsgA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.62 47.0 3.76e-01 82.5% 79.3%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.81e-01 91.2% 87.3%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 51.0 3.80e-01 100.0% 60.8%
1cboA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 50.0 3.21e-01 98.2% 77.7%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 42.0 3.41e-01 87.7% 36.8%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 46.0 3.93e-01 87.7% 92.2%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 47.0 3.82e-01 87.7% 68.1%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.60 44.0 4.02e-01 82.5% 80.2%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.60 46.0 3.99e-01 89.5% 61.9%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 50.0 3.88e-01 100.0% 70.4%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 46.0 3.96e-01 84.2% 75.8%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.53e-01 96.5% 77.3%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 45.0 3.85e-01 86.0% 61.6%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 49.0 3.08e-01 100.0% 75.6%
3kulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 40.0 3.59e-01 75.4% 93.3%
3r4qA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 40.0 3.11e-01 75.4% 78.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 4.33e-01 91.2% 81.2%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 41.0 4.22e-01 84.2% 100.0%
2v90C00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 41.0 3.62e-01 82.5% 77.4%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 42.0 3.38e-01 86.0% 86.7%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.55 44.0 4.02e-01 91.2% 79.7%
1luiA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 47.0 3.89e-01 100.0% 92.6%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.54 40.0 4.24e-01 82.5% 100.0%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 42.0 3.48e-01 89.5% 78.2%
6u5uG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 40.0 3.14e-01 84.2% 62.1%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 41.0 3.66e-01 91.2% 76.1%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.52 39.0 3.99e-01 84.2% 100.0%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 39.0 3.09e-01 84.2% 60.5%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 39.0 3.06e-01 100.0% 95.8%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.50 39.0 3.32e-01 89.5% 70.6%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4349149 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 71.0 6.00e-01 89.5% 81.1%
3918373 4.1.1.60 beta barrels › SH3 › SH3 › SH3 › YccV-like 0.85 77.0 5.66e-01 100.0% 66.4%
3645842 4.1.1.162 beta barrels › SH3 › SH3 › SH3 › DUF502 0.83 74.0 6.58e-01 98.2% 80.0%
3676628 4.1.1.162 beta barrels › SH3 › SH3 › SH3 › DUF502 0.83 74.0 5.71e-01 98.2% 53.3%
3953498 4.1.1.439 beta barrels › SH3 › SH3 › SH3 › PF26205 0.81 67.0 6.11e-01 91.2% 84.0%
3703932 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 67.0 6.64e-01 93.0% 88.3%
3259841 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 66.0 6.20e-01 94.7% 94.3%
3583597 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 60.0 5.10e-01 94.7% 53.3%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.97e-01 93.0% 85.7%
5017073 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.76 67.0 4.89e-01 98.2% 38.7%
3815495 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 64.0 5.94e-01 93.0% 82.9%
3621303 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 66.0 5.07e-01 100.0% 62.3%
4173765 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.74 65.0 5.91e-01 96.5% 80.0%
3550699 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.74 62.0 5.20e-01 93.0% 65.3%
3824699 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 62.0 5.98e-01 94.7% 87.7%
3686225 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 4.49e-01 98.2% 77.3%
3183093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 63.0 4.72e-01 96.5% 93.6%
3954938 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.65e-01 93.0% 84.6%
3389948 4.8.1.29 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SH3_AEBP2_C 0.71 51.0 4.19e-01 77.2% 43.0%
3290706 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.59e-01 87.7% 87.3%
4084495 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.71 56.0 4.66e-01 89.5% 98.1%
3888254 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 51.0 5.62e-01 82.5% 97.8%
3798312 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 61.0 5.78e-01 100.0% 85.7%
3927213 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.70 57.0 5.42e-01 93.0% 81.4%
3302166 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 58.0 5.63e-01 94.7% 87.7%
3995290 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.69 59.0 4.84e-01 100.0% 80.9%
3597789 219.1.1.4 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.68 60.0 3.74e-01 100.0% 27.5%
3530891 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 58.0 4.79e-01 100.0% 69.7%
3214307 3256.1.1.0 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.68 40.0 4.58e-01 78.9% 94.3%
2095505 1170.1.2.1 beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) › Cytomega_gL 0.67 50.0 4.08e-01 86.0% 43.7%
3460634 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.67 60.0 4.47e-01 100.0% 66.4%
4377694 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 49.0 4.20e-01 78.9% 98.9%
3229482 71.1.1.19 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.66 51.0 3.55e-01 86.0% 78.5%
3783352 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.66 51.0 3.08e-01 86.0% 29.4%
3517149 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 47.0 2.91e-01 78.9% 17.7%
3232669 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.65 48.0 3.92e-01 80.7% 76.4%
4076295 375.1.1.88 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ogr_Delta 0.65 47.0 4.79e-01 78.9% 80.0%
3368536 5.1.3.152 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SSL_N 0.64 49.0 3.10e-01 86.0% 22.9%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 51.0 4.97e-01 93.0% 86.2%
3749245 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.62 53.0 4.17e-01 100.0% 79.2%
5042874 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 49.0 3.97e-01 89.5% 84.3%
3948020 283.2.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.62 45.0 3.71e-01 78.9% 82.7%
4319566 2.1.1.290 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29066 0.62 49.0 3.75e-01 91.2% 64.1%
790 58.1.1.1 beta barrels › Oncogene product-like › Oncogene products › Oncogene products › TCL1_MTCP1 0.62 47.0 3.76e-01 82.5% 79.3%
9221 2003.1.2.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N 0.61 49.0 3.20e-01 96.5% 90.6%
3639738 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.60 46.0 4.42e-01 86.0% 92.5%
3277727 4.8.1.43 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.60 51.0 4.32e-01 94.7% 64.2%
3658750 220.1.1.78 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.60 48.0 3.89e-01 94.7% 69.6%
3067253 243.8.1.2 a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein › UDI 0.60 44.0 3.95e-01 82.5% 75.6%
3592422 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.59 45.0 2.81e-01 86.0% 86.5%
4932286 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.58 48.0 4.52e-01 98.2% 80.8%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.57 45.0 3.62e-01 93.0% 87.2%
3934655 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.06e-01 93.0% 97.6%
5018715 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 42.0 4.19e-01 82.5% 95.0%
3928760 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 44.0 2.76e-01 89.5% 21.9%
3657515 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.56 40.0 2.97e-01 80.7% 30.8%
4968081 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.56 43.0 4.37e-01 84.2% 90.9%
3591111 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 45.0 2.73e-01 100.0% 39.1%
3805000 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.54 40.0 2.70e-01 80.7% 29.4%
5029487 209.1.1.0 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.53 44.0 3.13e-01 100.0% 88.3%
5054433 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 38.0 4.02e-01 80.7% 96.0%
3913519 216.1.1.9 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 0.51 41.0 3.43e-01 93.0% 64.8%