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IMGVR_UViG_3300033165_000133-3300033165-Ga0334892_10038339

Arc-Vir

IMGVR_UViG_3300033165_000133-3300033165-Ga0334892_10038339

Quality

89.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-70
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k78I00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 6.28e-01 80.3% 86.2%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 72.0 6.69e-01 100.0% 92.7%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 5.52e-01 100.0% 60.0%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 4.70e-01 100.0% 41.3%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 4.72e-01 98.5% 44.2%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.74 64.0 4.43e-01 100.0% 28.8%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.94e-01 98.5% 84.3%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.50e-01 100.0% 70.4%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 66.0 6.14e-01 100.0% 95.1%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.73 66.0 4.94e-01 100.0% 55.8%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.77e-01 100.0% 82.2%
1ussA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.82e-01 100.0% 84.1%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.69e-01 100.0% 73.6%
1lddA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 6.07e-01 100.0% 97.3%
2vxzA02 1.10.10.1490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 62.0 5.74e-01 100.0% 93.1%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.91e-01 100.0% 80.5%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 6.17e-01 98.5% 98.4%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.71 63.0 4.37e-01 100.0% 30.3%
2od5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 5.58e-01 100.0% 81.3%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.40e-01 100.0% 69.4%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 5.75e-01 100.0% 95.1%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.68e-01 100.0% 86.7%
2xubA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.44e-01 100.0% 78.3%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.24e-01 100.0% 66.7%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.85e-01 100.0% 98.6%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.89e-01 98.5% 66.3%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 5.46e-01 98.5% 96.7%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 5.89e-01 100.0% 93.1%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 4.58e-01 100.0% 62.7%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.21e-01 100.0% 77.2%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.90e-01 100.0% 69.5%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 59.0 4.62e-01 100.0% 51.4%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 59.0 4.61e-01 100.0% 54.7%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 4.82e-01 100.0% 66.3%
6e3aA01 1.10.10.970 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain 0.65 56.0 5.38e-01 100.0% 97.4%
2fmlB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 52.0 5.29e-01 97.0% 96.9%
3i0pA01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.61 45.0 3.89e-01 80.3% 79.6%
1xeqB00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.59 43.0 4.05e-01 80.3% 88.2%
1w9lA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 35.0 4.08e-01 77.3% 100.0%
1h2uA01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 45.0 3.10e-01 89.4% 68.3%
7jsnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.55 44.0 3.22e-01 93.9% 98.1%
2xzmO02 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.52 38.0 3.82e-01 80.3% 98.6%
2oy9A01 1.10.220.80 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › BH2638-like 0.51 41.0 3.96e-01 97.0% 78.9%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4986778 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.79 70.0 5.77e-01 100.0% 59.2%
3268465 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 71.0 4.57e-01 98.5% 32.3%
5002434 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 66.0 6.36e-01 100.0% 80.0%
4954458 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 63.0 6.05e-01 100.0% 77.3%
5060421 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 63.0 6.59e-01 98.5% 98.3%
5003106 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.76 56.0 5.82e-01 100.0% 86.7%
4953964 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 67.0 5.68e-01 100.0% 69.1%
3933409 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 68.0 6.38e-01 100.0% 88.7%
3493350 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.75 66.0 5.78e-01 100.0% 71.0%
5057991 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 6.19e-01 93.9% 88.6%
3222309 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 54.0 5.65e-01 78.8% 93.3%
3477053 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 6.15e-01 100.0% 93.8%
5074322 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 6.14e-01 100.0% 83.5%
3621304 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 5.91e-01 98.5% 77.6%
3357833 101.1.2.509 alpha arrays › HTH › HTH › winged helix domain › PF25879 0.73 64.0 6.06e-01 100.0% 87.5%
4674912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 5.72e-01 100.0% 82.1%
3191548 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.72 63.0 5.90e-01 100.0% 89.3%
5059036 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.72 57.0 5.68e-01 100.0% 81.4%
3935822 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.72 64.0 5.79e-01 100.0% 73.3%
3400838 101.1.2.416 alpha arrays › HTH › HTH › winged helix domain › WH_Egal 0.72 63.0 5.62e-01 100.0% 74.7%
3394689 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 62.0 5.45e-01 100.0% 84.5%
5081885 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 64.0 5.99e-01 100.0% 83.7%
4981928 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.71 57.0 5.94e-01 100.0% 95.0%
5080644 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 6.08e-01 100.0% 97.3%
3398923 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.71 62.0 5.88e-01 100.0% 81.2%
5033944 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.71 56.0 5.89e-01 100.0% 95.0%
3582810 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 5.69e-01 100.0% 74.4%
4026195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.92e-01 100.0% 93.3%
3798195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.69e-01 100.0% 81.2%
4935583 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.71 56.0 5.68e-01 100.0% 87.7%
5008023 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.71 56.0 5.91e-01 100.0% 95.0%
3618492 101.1.2.416 alpha arrays › HTH › HTH › winged helix domain › WH_Egal 0.70 61.0 5.66e-01 100.0% 81.2%
5026909 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 62.0 5.86e-01 100.0% 83.7%
3650642 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.70 61.0 5.68e-01 100.0% 80.0%
3272172 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 62.0 5.78e-01 100.0% 80.0%
3390907 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.68e-01 100.0% 77.4%
4983039 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 60.0 5.32e-01 100.0% 79.8%
3179239 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.70 61.0 5.64e-01 100.0% 83.5%
3358560 101.1.2.509 alpha arrays › HTH › HTH › winged helix domain › PF25879 0.69 60.0 5.82e-01 98.5% 92.0%
3583002 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.69 61.0 6.01e-01 100.0% 97.1%
3805792 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.69 61.0 5.75e-01 100.0% 86.3%
3987997 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 5.70e-01 98.5% 96.0%
3607562 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 5.76e-01 97.0% 95.7%
5035389 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.48e-01 100.0% 77.6%
4002772 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 5.18e-01 100.0% 73.0%
4551352 101.1.1.462 alpha arrays › HTH › HTH › Three-helical HTH › PF27135 0.68 60.0 5.56e-01 100.0% 81.2%
3262645 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 5.22e-01 100.0% 69.5%
5047067 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 5.40e-01 100.0% 88.2%
4941477 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 5.08e-01 98.5% 69.0%
5073913 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 56.0 5.70e-01 100.0% 95.4%
3495187 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 57.0 4.17e-01 100.0% 37.4%
3033172 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 56.0 5.38e-01 100.0% 87.3%
3241023 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 56.0 3.35e-01 100.0% 98.4%
3464794 101.1.2.69 alpha arrays › HTH › HTH › winged helix domain › La 0.64 56.0 4.90e-01 100.0% 74.0%
3283379 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.63 54.0 4.73e-01 100.0% 67.6%
5049110 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.62 52.0 3.55e-01 95.5% 54.4%
5075649 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 4.99e-01 100.0% 80.7%
3700982 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 5.17e-01 98.5% 96.9%
3509489 325.1.1.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like 0.60 44.0 3.16e-01 95.5% 25.9%
3615532 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 4.87e-01 100.0% 87.5%
3716735 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 50.0 4.26e-01 100.0% 63.5%
4932775 616.1.1.1 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 0.54 40.0 4.06e-01 77.3% 98.5%
4050231 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.54 43.0 2.62e-01 93.9% 65.6%
3524960 108.1.1.76 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_FSTL1 0.52 44.0 3.75e-01 100.0% 91.7%
5063400 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.52 43.0 2.88e-01 98.5% 53.0%