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IMGVR_UViG_3300033170_000010-3300033170-Ga0334884_100153014
Arc-VirIMGVR_UViG_3300033170_000010-3300033170-Ga0334884_100153014
Identity
- Kingdom:
- archaea
Quality
81.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-72
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 56.0 | 5.55e-01 | 89.6% | 98.6% |
| 2p1gA02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.68 | 57.0 | 4.96e-01 | 91.0% | 96.0% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 44.0 | 4.43e-01 | 74.6% | 100.0% |
| 2b9lA03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 48.0 | 3.81e-01 | 89.6% | 97.9% |
| 2h6uA00 | 2.60.40.180 | Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain | 0.60 | 42.0 | 3.56e-01 | 74.6% | 52.6% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 45.0 | 4.64e-01 | 100.0% | 89.1% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 47.0 | 4.11e-01 | 86.6% | 96.0% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 46.0 | 3.96e-01 | 85.1% | 64.4% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 43.0 | 4.23e-01 | 79.1% | 94.4% |
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 3.77e-01 | 74.6% | 58.4% |
| 4ft4B01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.58 | 43.0 | 3.39e-01 | 82.1% | 58.7% |
| 4n0rA03 | 2.60.40.3950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 3.95e-01 | 88.1% | 98.2% |
| 2ec1A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 39.0 | 3.34e-01 | 71.6% | 77.1% |
| 6fnnB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 42.0 | 3.39e-01 | 80.6% | 91.7% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.57 | 42.0 | 3.25e-01 | 83.6% | 98.3% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 46.0 | 4.09e-01 | 89.6% | 81.8% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 43.0 | 4.08e-01 | 80.6% | 94.9% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 42.0 | 4.24e-01 | 83.6% | 98.6% |
| 1vwxY00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 45.0 | 3.68e-01 | 91.0% | 55.2% |
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 3.37e-01 | 76.1% | 77.6% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 38.0 | 3.02e-01 | 71.6% | 84.7% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 45.0 | 3.68e-01 | 95.5% | 71.6% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 46.0 | 4.17e-01 | 97.0% | 99.0% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 4.15e-01 | 77.6% | 95.2% |
| 2rovA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 37.0 | 3.20e-01 | 71.6% | 82.1% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 3.31e-01 | 73.1% | 79.0% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 4.09e-01 | 74.6% | 90.9% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 37.0 | 2.98e-01 | 71.6% | 77.5% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 37.0 | 2.93e-01 | 73.1% | 52.6% |
| 3e8vA00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.54 | 38.0 | 3.63e-01 | 76.1% | 62.2% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 44.0 | 2.98e-01 | 98.5% | 31.9% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 43.0 | 4.19e-01 | 98.5% | 93.8% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 4.07e-01 | 74.6% | 98.0% |
| 1xhnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 37.0 | 2.90e-01 | 76.1% | 85.5% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 43.0 | 2.98e-01 | 100.0% | 69.7% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 37.0 | 3.00e-01 | 79.1% | 86.8% |
| 1tvgA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 41.0 | 3.33e-01 | 88.1% | 75.0% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 37.0 | 3.44e-01 | 77.6% | 60.0% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 38.0 | 3.67e-01 | 80.6% | 98.7% |
| 2opjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 35.0 | 3.32e-01 | 73.1% | 77.9% |
| 7nitA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.20e-01 | 80.6% | 82.6% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 41.0 | 3.47e-01 | 92.5% | 92.4% |
| 6dgiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 40.0 | 3.16e-01 | 88.1% | 72.2% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3734395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 49.0 | 5.05e-01 | 79.1% | 95.2% |
| 3719783 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 49.0 | 4.37e-01 | 79.1% | 85.1% |
| 3373583 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 47.0 | 4.71e-01 | 79.1% | 94.3% |
| 3516333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 4.87e-01 | 76.1% | 90.9% |
| 3656952 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 43.0 | 3.66e-01 | 71.6% | 68.7% |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 4.88e-01 | 77.6% | 98.3% |
| 3616007 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.63 | 46.0 | 4.96e-01 | 77.6% | 100.0% |
| 3342814 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.63 | 46.0 | 4.13e-01 | 79.1% | 84.2% |
| 3368864 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 44.0 | 4.54e-01 | 76.1% | 92.3% |
| 3457163 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 45.0 | 4.31e-01 | 79.1% | 75.0% |
| 2770367 | 1.1.7.43 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › CoV_NSP13_1B | 0.61 | 47.0 | 4.38e-01 | 83.6% | 95.2% |
| 4319097 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.83e-01 | 83.6% | 94.8% |
| 3511551 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 45.0 | 4.70e-01 | 79.1% | 100.0% |
| 3936726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 43.0 | 4.65e-01 | 76.1% | 100.0% |
| 3879755 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.60 | 45.0 | 3.90e-01 | 80.6% | 72.4% |
| 3356605 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.60 | 43.0 | 3.94e-01 | 77.6% | 86.7% |
| 3645395 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 42.0 | 4.03e-01 | 76.1% | 96.2% |
| 3932484 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 4.39e-01 | 79.1% | 98.4% |
| 3834112 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 41.0 | 3.90e-01 | 73.1% | 95.0% |
| 3357709 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 42.0 | 3.95e-01 | 77.6% | 83.5% |
| 3742084 | 220.1.1.67 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 | 0.58 | 39.0 | 3.07e-01 | 71.6% | 49.1% |
| 2756510 | 4.1.1.131 ↗ | beta barrels › SH3 › SH3 › SH3 › MLVIN_C | 0.58 | 42.0 | 3.89e-01 | 79.1% | 61.8% |
| 3559960 | 2006.1.6.66 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 | 0.58 | 46.0 | 4.62e-01 | 88.1% | 92.9% |
| 3826751 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.57 | 42.0 | 3.97e-01 | 77.6% | 81.2% |
| 2784372 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.57 | 40.0 | 4.18e-01 | 74.6% | 84.1% |
| 3675120 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.57 | 42.0 | 3.92e-01 | 79.1% | 84.7% |
| 3627869 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.56 | 46.0 | 3.59e-01 | 92.5% | 43.2% |
| 3658643 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.56 | 48.0 | 3.83e-01 | 100.0% | 81.4% |
| 3975044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.56 | 43.0 | 4.17e-01 | 83.6% | 97.3% |
| 4210485 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.55 | 40.0 | 4.06e-01 | 77.6% | 86.2% |
| 3232211 | 11.2.1.58 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 | 0.55 | 39.0 | 2.80e-01 | 76.1% | 40.5% |
| 3247934 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.54 | 45.0 | 4.02e-01 | 92.5% | 97.9% |
| 3182013 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.54 | 41.0 | 3.11e-01 | 83.6% | 56.6% |
| 4429352 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 45.0 | 4.07e-01 | 91.0% | 84.4% |
| 3183093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 39.0 | 3.10e-01 | 77.6% | 53.6% |
| 5040230 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.53 | 38.0 | 3.89e-01 | 77.6% | 78.5% |
| 4963598 | 1.1.7.150 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26503 | 0.53 | 40.0 | 3.86e-01 | 80.6% | 78.7% |
| 3615787 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.53 | 47.0 | 3.26e-01 | 100.0% | 76.9% |
| 4505797 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.52 | 38.0 | 3.90e-01 | 80.6% | 90.8% |
| 4308473 | 10.12.1.41 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CsiD | 0.52 | 36.0 | 2.35e-01 | 74.6% | 15.1% |
| 5067372 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.52 | 37.0 | 3.85e-01 | 79.1% | 85.0% |
| 3928662 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.52 | 40.0 | 3.05e-01 | 88.1% | 90.8% |
| 3520654 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.52 | 45.0 | 3.54e-01 | 100.0% | 80.0% |
| 3469342 | 11.1.4.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Pollen_Ole_e_1 | 0.52 | 35.0 | 3.11e-01 | 71.6% | 47.6% |
| 3743935 | 1.1.8.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C | 0.51 | 37.0 | 3.54e-01 | 77.6% | 65.0% |
| 3549321 | 4.11.1.5 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24, PF31032 | 0.51 | 42.0 | 3.38e-01 | 100.0% | 56.2% |
| 4961053 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.51 | 36.0 | 3.28e-01 | 76.1% | 55.8% |
| 3184485 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.50 | 34.0 | 2.92e-01 | 70.1% | 44.4% |
| 3622767 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.50 | 40.0 | 3.71e-01 | 94.0% | 87.4% |
| 4472412 | 223.11.1.1 ↗ | a+b three layers › Profilin-like › N-terminal domain of Apc beta-subunit › N-terminal domain of Apc beta-subunit › Hydantoinase_B | 0.50 | 38.0 | 2.78e-01 | 86.6% | 64.4% |
D2
high
residues 76-152
Domain cluster:
rep: IMGVR_UViG_3300001866_000001-3300001866-JGI24729J20445_100003714__D77-142