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IMGVR_UViG_3300033170_000010-3300033170-Ga0334884_10015305
Arc-VirIMGVR_UViG_3300033170_000010-3300033170-Ga0334884_10015305
Identity
- Kingdom:
- archaea
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-77
Domain cluster:
rep: IMGVR_UViG_2630968343_000001-2630968343-2631418162__D23-77
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.58 | 33.0 | 3.61e-01 | 71.1% | 67.7% |
| 3gceA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 48.0 | 4.31e-01 | 96.1% | 67.3% |
| 2nutA02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.56 | 34.0 | 3.69e-01 | 72.4% | 72.1% |
| 1g8jB00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.55 | 48.0 | 4.10e-01 | 100.0% | 85.2% |
| 5cxmA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.54 | 43.0 | 3.99e-01 | 96.1% | 66.7% |
| 6e0bA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 39.0 | 2.61e-01 | 81.6% | 92.0% |
| 1ce7B01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 39.0 | 3.23e-01 | 78.9% | 94.8% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.52 | 39.0 | 2.85e-01 | 78.9% | 35.8% |
| 1q90C00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.51 | 45.0 | 3.85e-01 | 100.0% | 64.3% |
| 1l5jA02 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.51 | 35.0 | 2.52e-01 | 75.0% | 27.0% |
| 1xhbA03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 38.0 | 3.21e-01 | 80.3% | 96.1% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4061049 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.90 | 44.0 | 6.01e-01 | 71.1% | 92.5% |
| 4944100 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.86 | 41.0 | 5.62e-01 | 71.1% | 90.0% |
| 5025138 | 101.1.10.80 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Zn_Ribbon_TF | 0.85 | 44.0 | 3.11e-01 | 73.7% | 19.5% |
| 4287145 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.85 | 41.0 | 4.69e-01 | 71.1% | 61.7% |
| 5023273 | 4294.1.1.12 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Zn_Ribbon_TF | 0.81 | 43.0 | 5.25e-01 | 75.0% | 80.0% |
| 3330763 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.80 | 41.0 | 5.42e-01 | 72.4% | 95.0% |
| 3613928 | 375.1.1.137 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIB_Zn-ribbon_Tryp | 0.75 | 43.0 | 5.39e-01 | 75.0% | 97.8% |
| 3819668 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.65 | 38.0 | 4.63e-01 | 80.3% | 100.0% |
| 3317170 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.60 | 28.0 | 3.44e-01 | 93.4% | 71.1% |
| 3584741 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 28.0 | 3.44e-01 | 90.8% | 75.6% |
| 3503411 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 28.0 | 3.53e-01 | 90.8% | 80.0% |
| 4030189 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.56 | 27.0 | 3.02e-01 | 77.6% | 56.7% |
| 3931038 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.56 | 40.0 | 3.33e-01 | 76.3% | 91.1% |
| 3927403 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.55 | 40.0 | 3.36e-01 | 76.3% | 93.8% |
| 4964214 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.54 | 34.0 | 3.82e-01 | 89.5% | 87.3% |
| 3576007 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.54 | 40.0 | 3.31e-01 | 76.3% | 89.9% |
| 3758626 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.54 | 41.0 | 4.49e-01 | 80.3% | 95.4% |
| 3415669 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.54 | 40.0 | 3.37e-01 | 77.6% | 93.6% |
| 3621591 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.54 | 39.0 | 3.08e-01 | 77.6% | 96.2% |
| 4948509 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.52 | 45.0 | 3.99e-01 | 96.1% | 68.5% |
| 3363052 | 386.1.1.207 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED_2 | 0.52 | 28.0 | 3.01e-01 | 71.1% | 56.9% |
| 1162279 | 2003.1.5.91 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Reovirus_L2_MT2 | 0.51 | 36.0 | 2.57e-01 | 92.1% | 24.7% |
| 3177549 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.51 | 34.0 | 3.81e-01 | 90.8% | 86.7% |
| 3927692 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.51 | 39.0 | 3.29e-01 | 81.6% | 93.1% |
| 3837944 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 35.0 | 3.10e-01 | 72.4% | 50.4% |