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IMGVR_UViG_3300033171_000009-3300033171-Ga0334895_100071460

Arc-Vir

IMGVR_UViG_3300033171_000009-3300033171-Ga0334895_100071460

Quality

88.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-58
PDB
Domain cluster: representative
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.78 69.0 6.39e-01 100.0% 87.8%
1nh8A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.78 69.0 6.53e-01 100.0% 95.5%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 64.0 6.12e-01 98.2% 97.0%
3cedA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.73 64.0 5.38e-01 100.0% 80.6%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.71 60.0 5.08e-01 100.0% 65.0%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 58.0 5.43e-01 98.2% 89.2%
3r8yA01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.69 56.0 5.38e-01 100.0% 78.8%
4yn3B00 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.69 59.0 5.67e-01 100.0% 84.6%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 59.0 5.04e-01 100.0% 80.4%
1x31C02 3.30.70.1520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Heterotetrameric sarcosine oxidase 0.69 60.0 5.43e-01 100.0% 95.0%
1kkhA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.68 58.0 4.50e-01 98.2% 93.1%
3oh8A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.68 54.0 4.19e-01 93.0% 92.1%
4ammA00 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.68 58.0 3.54e-01 100.0% 14.8%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.67 53.0 4.38e-01 91.2% 59.1%
4labA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.67 55.0 4.00e-01 100.0% 40.1%
4hvmD02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.66 52.0 3.70e-01 91.2% 93.9%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.66 52.0 4.49e-01 91.2% 92.9%
3bv8A00 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.66 53.0 4.73e-01 100.0% 61.2%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 40.0 3.29e-01 91.2% 31.5%
3g87A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.66 56.0 5.38e-01 100.0% 94.0%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 51.0 4.08e-01 91.2% 98.4%
4mz0B05 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.65 55.0 5.33e-01 100.0% 88.1%
2hiyA01 3.30.70.1280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains 0.64 54.0 4.80e-01 100.0% 80.7%
7ahbB01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.64 55.0 5.45e-01 100.0% 100.0%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 51.0 3.92e-01 93.0% 93.1%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.63 53.0 4.44e-01 100.0% 92.6%
2jfdA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.63 52.0 5.09e-01 100.0% 87.9%
2o6cA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.63 55.0 4.02e-01 100.0% 74.1%
3w3sA01 3.30.70.1920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 49.0 3.63e-01 93.0% 36.3%
7agpA01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.61 51.0 5.09e-01 100.0% 100.0%
1nrkA01 3.30.70.1630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 49.0 4.33e-01 98.2% 73.2%
1wzaA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 45.0 4.08e-01 91.2% 58.2%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 43.0 3.57e-01 78.9% 94.7%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 37.0 3.08e-01 91.2% 31.5%
3f5rA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 43.0 3.47e-01 100.0% 38.1%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.59 48.0 4.25e-01 100.0% 94.8%
2e9xB01 3.40.5.50 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.59 45.0 4.35e-01 100.0% 72.7%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.59 47.0 3.58e-01 89.5% 47.8%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 47.0 3.96e-01 96.5% 78.6%
3orqA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.58 44.0 3.09e-01 86.0% 29.4%
2kdoA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 4.40e-01 100.0% 81.2%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.58 49.0 3.79e-01 100.0% 54.9%
3ndzE00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 47.0 4.00e-01 98.2% 83.2%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.05e-01 89.5% 80.2%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 48.0 3.99e-01 100.0% 59.5%
1n26A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.00e-01 100.0% 78.5%
5wkfD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 3.94e-01 98.2% 79.6%
3f0zA01 3.30.310.260 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 44.0 3.69e-01 91.2% 93.8%
1x44A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 46.0 3.93e-01 96.5% 68.0%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 43.0 4.01e-01 91.2% 81.0%
2qa1A02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 47.0 4.29e-01 100.0% 96.2%
3qdhA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 3.47e-01 100.0% 56.4%
3fanA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 46.0 4.29e-01 100.0% 74.0%
2cwrA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 46.0 4.00e-01 100.0% 61.9%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 40.0 3.54e-01 82.5% 64.8%
2rikA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.96e-01 100.0% 80.4%
1q8mA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.62e-01 100.0% 79.3%
2rttA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.64e-01 94.7% 82.9%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.52 37.0 2.82e-01 80.7% 85.9%
3wo4C03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.49e-01 98.2% 77.5%
2v3mA00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.51 38.0 3.44e-01 91.2% 66.0%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4011265 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.76 67.0 6.29e-01 100.0% 91.4%
4936728 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.73 63.0 6.08e-01 100.0% 86.2%
4947594 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.72 61.0 5.67e-01 98.2% 77.3%
5073130 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.72 51.0 4.07e-01 75.4% 95.6%
5031736 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.71 60.0 5.79e-01 96.5% 93.8%
4957296 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 60.0 5.70e-01 100.0% 95.7%
5047332 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.71 61.0 5.52e-01 100.0% 80.0%
3200754 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.70 59.0 5.37e-01 100.0% 87.5%
5014095 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 53.0 5.28e-01 93.0% 81.7%
4961982 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.68 58.0 5.75e-01 100.0% 98.3%
5011762 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.68 58.0 5.73e-01 100.0% 98.3%
4950570 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.67 56.0 5.47e-01 100.0% 86.2%
3838308 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.66 54.0 5.31e-01 98.2% 98.5%
4097274 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.66 56.0 5.47e-01 100.0% 87.7%
4360820 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 53.0 4.29e-01 93.0% 76.4%
3885767 11.1.1.127 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL6Ra-bind 0.64 55.0 4.39e-01 100.0% 70.8%
5068716 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.63 53.0 3.37e-01 100.0% 18.8%
4028473 331.23.1.7 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C 0.62 48.0 4.57e-01 93.0% 94.7%
147041 3253.1.1.1 a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › FHIPEP 0.62 47.0 4.86e-01 100.0% 98.0%
5046984 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 4.16e-01 100.0% 54.7%
4957085 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 50.0 4.89e-01 100.0% 87.7%
4324318 11.1.1.230 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YBD 0.60 48.0 3.72e-01 91.2% 70.4%
4943458 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 42.0 3.36e-01 75.4% 83.1%
4208333 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 42.0 3.38e-01 75.4% 79.2%
5077329 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 42.0 3.28e-01 77.2% 97.8%
3601899 10.15.1.0 beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like 0.55 45.0 3.67e-01 100.0% 44.8%
3956941 11.1.5.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 0.54 46.0 3.92e-01 100.0% 69.0%
3704915 10.15.1.1 beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 0.53 44.0 3.64e-01 100.0% 49.6%
5073022 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 40.0 3.12e-01 84.2% 65.9%
4947665 223.2.1.58 a+b three layers › Profilin-like › profilin-like › profilin-like › Arf 0.53 43.0 3.46e-01 93.0% 89.2%
5076068 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.53 37.0 3.09e-01 75.4% 83.8%
4943575 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 43.0 3.26e-01 91.2% 80.7%
4113036 11.1.1.1109 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_2 0.52 43.0 3.74e-01 100.0% 62.0%
4944750 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 38.0 2.96e-01 80.7% 68.6%
5050992 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 38.0 3.11e-01 84.2% 72.6%
4977721 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 39.0 3.09e-01 87.7% 88.1%
4999058 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 37.0 3.25e-01 82.5% 93.7%
5076535 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 41.0 3.17e-01 91.2% 86.2%
5072525 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 38.0 3.04e-01 84.2% 71.8%
5045210 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 37.0 3.03e-01 84.2% 72.0%
4946284 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 39.0 3.17e-01 91.2% 76.8%
3701164 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 39.0 3.19e-01 96.5% 71.1%