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IMGVR_UViG_3300033171_000355-3300033171-Ga0334895_100348618
Arc-VirIMGVR_UViG_3300033171_000355-3300033171-Ga0334895_100348618
Identity
- Kingdom:
- archaea
Quality
88.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-77
Domain cluster:
representative
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jgcA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.93 | 88.0 | 6.08e-01 | 100.0% | 36.3% |
| 3e6sA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.92 | 86.0 | 6.03e-01 | 100.0% | 36.5% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.92 | 86.0 | 6.15e-01 | 100.0% | 39.6% |
| 5u1aL00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 86.0 | 5.91e-01 | 100.0% | 35.5% |
| 3ez0C00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 77.0 | 5.07e-01 | 91.2% | 29.8% |
| 3qhbA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.90 | 83.0 | 5.64e-01 | 100.0% | 32.4% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.89 | 82.0 | 5.29e-01 | 100.0% | 26.8% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.89 | 82.0 | 5.00e-01 | 100.0% | 19.1% |
| 3ok8A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.89 | 82.0 | 5.36e-01 | 100.0% | 28.3% |
| 1otkA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.87 | 73.0 | 4.71e-01 | 91.2% | 25.4% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.87 | 75.0 | 5.44e-01 | 94.7% | 100.0% |
| 2itbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.87 | 78.0 | 5.24e-01 | 100.0% | 28.3% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.87 | 78.0 | 5.20e-01 | 100.0% | 27.7% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 77.0 | 7.50e-01 | 100.0% | 88.7% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.87 | 75.0 | 5.48e-01 | 94.7% | 51.7% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.87 | 73.0 | 7.04e-01 | 100.0% | 81.2% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.87 | 78.0 | 5.02e-01 | 100.0% | 28.1% |
| 3pwfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.86 | 78.0 | 5.85e-01 | 100.0% | 45.0% |
| 3lmfA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.86 | 69.0 | 5.47e-01 | 89.5% | 45.0% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.85 | 77.0 | 5.81e-01 | 100.0% | 44.6% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.85 | 74.0 | 7.43e-01 | 100.0% | 94.8% |
| 4fm3A00 | 1.20.1270.390 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.85 | 77.0 | 6.30e-01 | 96.5% | 57.9% |
| 1qu7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.85 | 75.0 | 4.95e-01 | 100.0% | 58.1% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.85 | 65.0 | 6.01e-01 | 98.2% | 66.2% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.84 | 75.0 | 6.55e-01 | 100.0% | 68.2% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.83 | 73.0 | 4.97e-01 | 100.0% | 30.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.82 | 71.0 | 7.01e-01 | 98.2% | 88.5% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.82 | 73.0 | 5.83e-01 | 100.0% | 53.6% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.82 | 63.0 | 5.98e-01 | 84.2% | 76.5% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 68.0 | 5.96e-01 | 96.5% | 62.4% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.81 | 70.0 | 6.91e-01 | 96.5% | 93.3% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.81 | 69.0 | 5.59e-01 | 96.5% | 59.1% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.81 | 72.0 | 6.38e-01 | 100.0% | 71.6% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.80 | 66.0 | 5.03e-01 | 93.0% | 39.1% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.80 | 66.0 | 4.88e-01 | 93.0% | 36.4% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.80 | 71.0 | 6.23e-01 | 100.0% | 84.7% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 69.0 | 5.98e-01 | 100.0% | 68.5% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.80 | 69.0 | 6.59e-01 | 98.2% | 91.0% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 66.0 | 6.59e-01 | 93.0% | 91.5% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 68.0 | 5.29e-01 | 100.0% | 44.6% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.79 | 70.0 | 5.68e-01 | 100.0% | 64.5% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.79 | 69.0 | 5.96e-01 | 100.0% | 67.8% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 67.0 | 4.35e-01 | 100.0% | 27.4% |
| 2pusA04 | 6.10.140.300 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 63.0 | 5.05e-01 | 91.2% | 46.3% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.78 | 67.0 | 4.87e-01 | 98.2% | 36.2% |
| 4ehsA00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.78 | 60.0 | 4.64e-01 | 89.5% | 38.7% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 68.0 | 6.51e-01 | 100.0% | 88.1% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 67.0 | 5.70e-01 | 100.0% | 64.6% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 67.0 | 6.27e-01 | 100.0% | 83.1% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 67.0 | 4.30e-01 | 100.0% | 21.8% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.77 | 66.0 | 6.11e-01 | 100.0% | 93.4% |
| 4dkcB00 | 1.20.1250.80 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 | 0.76 | 61.0 | 4.45e-01 | 96.5% | 31.9% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 64.0 | 4.67e-01 | 96.5% | 36.5% |
| 5ux1D00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 63.0 | 4.42e-01 | 98.2% | 29.9% |
| 1zbtA01 | 6.10.140.1950 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 63.0 | 5.59e-01 | 100.0% | 65.1% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 63.0 | 5.24e-01 | 96.5% | 83.5% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 62.0 | 6.15e-01 | 100.0% | 93.5% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.73 | 62.0 | 4.90e-01 | 94.7% | 47.9% |
| 2dfkC01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.72 | 64.0 | 4.32e-01 | 100.0% | 45.3% |
| 1cm5A00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.72 | 62.0 | 3.45e-01 | 100.0% | 7.6% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.72 | 58.0 | 5.79e-01 | 100.0% | 89.7% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.71 | 59.0 | 4.24e-01 | 98.2% | 32.8% |
| 3cegA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.71 | 62.0 | 3.94e-01 | 100.0% | 95.5% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 60.0 | 4.91e-01 | 100.0% | 50.0% |
| 3rm5B02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.71 | 62.0 | 4.16e-01 | 100.0% | 25.9% |
| 2fonA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.71 | 61.0 | 4.75e-01 | 100.0% | 57.4% |
| 4gyvE00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.70 | 59.0 | 4.07e-01 | 100.0% | 79.1% |
| 1aluA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.70 | 59.0 | 4.41e-01 | 100.0% | 96.8% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 59.0 | 4.99e-01 | 98.2% | 55.4% |
| 7csoA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.70 | 58.0 | 3.99e-01 | 98.2% | 45.5% |
| 1a22A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.70 | 61.0 | 4.32e-01 | 100.0% | 66.7% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 59.0 | 4.71e-01 | 100.0% | 70.5% |
| 4gouA03 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.69 | 57.0 | 4.05e-01 | 100.0% | 31.0% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 59.0 | 5.64e-01 | 98.2% | 86.4% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.68 | 51.0 | 3.57e-01 | 80.7% | 66.5% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.68 | 59.0 | 4.73e-01 | 100.0% | 50.0% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.67 | 61.0 | 4.84e-01 | 100.0% | 81.1% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 56.0 | 5.41e-01 | 100.0% | 90.8% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.65 | 56.0 | 4.37e-01 | 98.2% | 72.2% |
| 6g94A00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.63 | 48.0 | 3.49e-01 | 86.0% | 42.4% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3709410 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.94 | 88.0 | 5.62e-01 | 100.0% | 25.7% |
| 3959085 | 109.4.1.637 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2339 | 0.93 | 86.0 | 5.32e-01 | 98.2% | 21.9% |
| 5069014 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.93 | 87.0 | 6.30e-01 | 100.0% | 41.4% |
| 3288075 | 2004.1.1.600 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn, AAA_21 | 0.92 | 79.0 | 4.42e-01 | 91.2% | 9.4% |
| 3289420 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.92 | 78.0 | 4.38e-01 | 91.2% | 9.6% |
| 3952795 | 3892.1.1.1 ↗ | alpha bundles › Transhydrogeanse domain II › Transhydrogeanse domain II › Transhydrogeanse domain II › PNTB | 0.91 | 77.0 | 4.76e-01 | 89.5% | 18.2% |
| 5062526 | 3892.1.1.1 ↗ | alpha bundles › Transhydrogeanse domain II › Transhydrogeanse domain II › Transhydrogeanse domain II › PNTB | 0.91 | 78.0 | 4.81e-01 | 91.2% | 18.6% |
| 3355429 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.90 | 80.0 | 7.64e-01 | 100.0% | 83.1% |
| 4467968 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.90 | 84.0 | 6.38e-01 | 100.0% | 47.5% |
| 3397137 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.90 | 73.0 | 6.56e-01 | 91.2% | 65.3% |
| 3450966 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.90 | 85.0 | 5.84e-01 | 100.0% | 67.3% |
| 4883924 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.89 | 79.0 | 6.94e-01 | 94.7% | 78.8% |
| 5005097 | 3710.1.1.0 ↗ | alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain | 0.88 | 78.0 | 5.78e-01 | 100.0% | 41.4% |
| 5062016 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.87 | 79.0 | 6.46e-01 | 100.0% | 58.0% |
| 3169381 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.87 | 79.0 | 5.25e-01 | 100.0% | 30.2% |
| 3962991 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 78.0 | 5.29e-01 | 100.0% | 35.4% |
| 3875112 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.87 | 76.0 | 4.61e-01 | 100.0% | 16.2% |
| 3615972 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.86 | 77.0 | 5.31e-01 | 100.0% | 34.6% |
| 3250955 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.86 | 77.0 | 4.82e-01 | 100.0% | 69.1% |
| 5056427 | 3843.1.1.38 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › T4SS_pilin | 0.85 | 76.0 | 6.10e-01 | 100.0% | 61.8% |
| 4317199 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.85 | 76.0 | 5.86e-01 | 100.0% | 46.4% |
| 5040287 | 109.4.1.637 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2339 | 0.85 | 76.0 | 4.55e-01 | 100.0% | 16.2% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.85 | 76.0 | 6.63e-01 | 100.0% | 78.8% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.85 | 75.0 | 6.74e-01 | 100.0% | 83.7% |
| 5077093 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.85 | 74.0 | 5.52e-01 | 100.0% | 40.7% |
| 3362472 | 605.1.1.132 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641 | 0.84 | 76.0 | 6.05e-01 | 100.0% | 52.7% |
| 3967123 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 75.0 | 6.64e-01 | 98.2% | 71.2% |
| 3338292 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.84 | 75.0 | 5.70e-01 | 100.0% | 43.8% |
| 3872955 | 109.4.1.2380 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_10, TPR_12, TPR_MalT | 0.84 | 74.0 | 4.23e-01 | 100.0% | 11.2% |
| 3819179 | 632.7.1.62 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › DUF641 | 0.84 | 75.0 | 5.57e-01 | 100.0% | 41.4% |
| 5016147 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.84 | 73.0 | 5.45e-01 | 100.0% | 40.7% |
| 3837404 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.84 | 74.0 | 5.66e-01 | 100.0% | 53.1% |
| 3969814 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.84 | 73.0 | 6.71e-01 | 98.2% | 94.7% |
| 3984016 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 73.0 | 6.23e-01 | 100.0% | 61.1% |
| 5078048 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.83 | 75.0 | 6.84e-01 | 100.0% | 82.7% |
| 3753969 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.83 | 73.0 | 6.11e-01 | 100.0% | 63.0% |
| 4927596 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.83 | 74.0 | 5.65e-01 | 100.0% | 44.6% |
| 3696767 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.83 | 72.0 | 4.27e-01 | 100.0% | 13.8% |
| 3813837 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.83 | 74.0 | 6.78e-01 | 100.0% | 78.7% |
| 3795144 | 3615.1.1.9 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › TMEM72 | 0.83 | 72.0 | 5.47e-01 | 96.5% | 43.8% |
| 5022672 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.83 | 73.0 | 6.19e-01 | 100.0% | 62.1% |
| 4541195 | 3755.3.1.470 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T3SSipB | 0.82 | 73.0 | 5.56e-01 | 100.0% | 50.8% |
| 3738678 | 3343.1.1.0 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) | 0.82 | 73.0 | 5.58e-01 | 98.2% | 45.6% |
| 3452483 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.82 | 70.0 | 4.87e-01 | 100.0% | 29.7% |
| 4985493 | 3834.1.1.0 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain | 0.82 | 70.0 | 4.53e-01 | 100.0% | 21.6% |
| 3294587 | 1134.1.2.2 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain › DUF641 | 0.82 | 73.0 | 5.56e-01 | 100.0% | 44.6% |
| 3965957 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.82 | 72.0 | 6.60e-01 | 100.0% | 78.7% |
| 3967983 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.82 | 71.0 | 6.34e-01 | 100.0% | 68.8% |
| 4258322 | 5086.1.1.189 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_CzcB | 0.82 | 72.0 | 6.77e-01 | 100.0% | 85.7% |
| 4581983 | 5086.1.1.13 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › T3SSipB | 0.81 | 71.0 | 5.30e-01 | 98.2% | 71.4% |
| 3699313 | 6155.1.1.4 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MPC | 0.81 | 72.0 | 6.13e-01 | 98.2% | 64.4% |
| 3411108 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.81 | 60.0 | 4.54e-01 | 80.7% | 52.6% |
| 3948872 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.80 | 71.0 | 5.43e-01 | 100.0% | 45.4% |
| 3974231 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.80 | 70.0 | 6.62e-01 | 100.0% | 84.3% |
| 4962483 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.80 | 70.0 | 4.73e-01 | 98.2% | 26.8% |
| 3970512 | 5086.1.1.189 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_CzcB | 0.79 | 70.0 | 6.41e-01 | 100.0% | 80.0% |
| 3691039 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.79 | 69.0 | 6.20e-01 | 100.0% | 77.5% |
| 3166260 | 1.1.7.123 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25885 | 0.79 | 69.0 | 5.34e-01 | 100.0% | 45.4% |
| 3777869 | 192.13.1.2 ↗ | alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Nexin_C | 0.79 | 68.0 | 5.36e-01 | 98.2% | 47.5% |
| 3531576 | 192.13.1.0 ↗ | alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like | 0.78 | 67.0 | 6.35e-01 | 98.2% | 81.4% |
| 3415494 | 5029.1.1.0 ↗ | extended segments › Oligosaccharyltransferase subunit ost4p › Oligosaccharyltransferase subunit ost4p › Oligosaccharyltransferase subunit ost4p | 0.78 | 70.0 | 6.93e-01 | 100.0% | 95.0% |
| 3964187 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.78 | 69.0 | 6.17e-01 | 100.0% | 73.8% |
| 3192393 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.78 | 62.0 | 3.50e-01 | 96.5% | 8.1% |
| 4663047 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 67.0 | 4.52e-01 | 100.0% | 68.9% |
| 3276221 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.77 | 66.0 | 5.14e-01 | 100.0% | 53.1% |
| 3585987 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.76 | 65.0 | 5.99e-01 | 98.2% | 77.3% |
| 3902495 | 603.1.1.23 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Sec20 | 0.76 | 65.0 | 4.40e-01 | 100.0% | 28.2% |
| 4846601 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.75 | 65.0 | 5.13e-01 | 100.0% | 50.8% |
| 3917098 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.75 | 58.0 | 3.33e-01 | 100.0% | 9.1% |
| 3463944 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.75 | 65.0 | 5.13e-01 | 98.2% | 48.3% |
| 3596422 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.74 | 63.0 | 3.70e-01 | 98.2% | 11.7% |
| 4994040 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.74 | 62.0 | 5.33e-01 | 100.0% | 59.0% |
| 3736652 | 192.29.1.102 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Fung_rhodopsin | 0.74 | 64.0 | 5.79e-01 | 100.0% | 77.5% |
| 4304767 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.72 | 62.0 | 5.24e-01 | 100.0% | 59.0% |
| 5023334 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.66 | 58.0 | 5.22e-01 | 98.2% | 71.2% |
| 4965867 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.65 | 57.0 | 4.85e-01 | 96.5% | 61.1% |
D2
high
residues 79-139
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.77 | 63.0 | 5.81e-01 | 100.0% | 70.1% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.77 | 49.0 | 3.78e-01 | 70.5% | 29.4% |
| 6fgjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.76 | 39.0 | 2.89e-01 | 93.4% | 20.0% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 46.0 | 3.58e-01 | 85.2% | 31.1% |
| 1bvuA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.70 | 60.0 | 4.60e-01 | 98.4% | 41.1% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.69 | 47.0 | 4.40e-01 | 100.0% | 57.1% |
| 7f79A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.69 | 58.0 | 4.36e-01 | 100.0% | 37.3% |
| 4eziA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.68 | 58.0 | 3.84e-01 | 100.0% | 25.3% |
| 1hwyA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.67 | 58.0 | 4.42e-01 | 98.4% | 45.0% |
| 3mwcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.67 | 59.0 | 4.61e-01 | 100.0% | 79.3% |
| 3atsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 47.0 | 3.77e-01 | 73.8% | 70.7% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.67 | 57.0 | 4.24e-01 | 100.0% | 43.4% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.66 | 44.0 | 4.33e-01 | 98.4% | 63.6% |
| 2chrA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 57.0 | 4.55e-01 | 100.0% | 84.3% |
| 1jpdX01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.66 | 57.0 | 4.90e-01 | 100.0% | 90.9% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 48.0 | 4.64e-01 | 100.0% | 71.4% |
| 5n9bA01 | 2.60.40.2160 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 | 0.65 | 58.0 | 4.44e-01 | 100.0% | 61.3% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 43.0 | 3.44e-01 | 70.5% | 32.1% |
| 3ijlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.65 | 56.0 | 4.73e-01 | 100.0% | 94.4% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.65 | 58.0 | 4.38e-01 | 100.0% | 95.2% |
| 8in8C01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 55.0 | 3.67e-01 | 100.0% | 25.6% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 49.0 | 4.75e-01 | 100.0% | 76.5% |
| 3akoD00 | 6.20.160.10 | Special › Other non-globular › HSP40/DNAj peptide-binding domain › | 0.62 | 35.0 | 3.31e-01 | 100.0% | 42.1% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 45.0 | 3.72e-01 | 78.7% | 43.8% |
| 3cyjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 52.0 | 4.27e-01 | 100.0% | 84.4% |
| 2r5rA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.61 | 54.0 | 3.52e-01 | 96.7% | 64.6% |
| 2daxA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.61 | 50.0 | 3.91e-01 | 95.1% | 83.7% |
| 1oygA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 51.0 | 3.05e-01 | 93.4% | 24.0% |
| 4yfbC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.61 | 48.0 | 4.40e-01 | 100.0% | 66.7% |
| 4dduA07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.60 | 54.0 | 4.49e-01 | 100.0% | 57.9% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.60 | 44.0 | 4.15e-01 | 100.0% | 64.0% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 40.0 | 3.06e-01 | 90.2% | 28.6% |
| 3g2mB01 | 6.20.160.20 | Special › Other non-globular › HSP40/DNAj peptide-binding domain › | 0.57 | 33.0 | 3.62e-01 | 95.1% | 71.4% |
| 2wozA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.56 | 37.0 | 2.46e-01 | 72.1% | 13.7% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.56 | 45.0 | 3.70e-01 | 96.7% | 45.6% |
| 4d47A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 41.0 | 2.58e-01 | 82.0% | 12.4% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.56 | 43.0 | 3.13e-01 | 85.2% | 73.5% |
| 4bs9A05 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 46.0 | 3.87e-01 | 98.4% | 57.0% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 46.0 | 3.20e-01 | 100.0% | 25.4% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 39.0 | 4.10e-01 | 83.6% | 87.3% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 43.0 | 4.00e-01 | 93.4% | 66.3% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.55 | 46.0 | 3.65e-01 | 100.0% | 72.9% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 43.0 | 2.98e-01 | 98.4% | 77.9% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 41.0 | 3.09e-01 | 85.2% | 38.5% |
| 3mjqA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 35.0 | 2.97e-01 | 70.5% | 37.4% |
| 1gkuB07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.54 | 47.0 | 4.03e-01 | 100.0% | 60.8% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 44.0 | 3.01e-01 | 98.4% | 73.5% |
| 2o95B00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 41.0 | 3.07e-01 | 86.9% | 36.9% |
| 7sxqA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 45.0 | 3.06e-01 | 100.0% | 77.4% |
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.53 | 46.0 | 3.33e-01 | 98.4% | 57.4% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.53 | 42.0 | 3.18e-01 | 96.7% | 44.4% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.53 | 42.0 | 3.20e-01 | 95.1% | 53.2% |
| 2ebkA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 43.0 | 3.56e-01 | 100.0% | 51.6% |
| 3wodG00 | 2.30.30.1250 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 3.16e-01 | 83.6% | 48.8% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 35.0 | 3.39e-01 | 75.4% | 59.7% |
| 2akjA03 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.52 | 43.0 | 3.57e-01 | 100.0% | 95.2% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 42.0 | 4.06e-01 | 100.0% | 81.8% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 35.0 | 2.93e-01 | 70.5% | 36.1% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4007983 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.83 | 68.0 | 5.78e-01 | 100.0% | 56.8% |
| 4009814 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.76 | 64.0 | 6.29e-01 | 96.7% | 86.2% |
| 3588583 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.76 | 56.0 | 4.19e-01 | 78.7% | 49.0% |
| 3984933 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.75 | 65.0 | 5.69e-01 | 100.0% | 64.4% |
| 3942150 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.74 | 64.0 | 5.61e-01 | 100.0% | 64.4% |
| 4963927 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.73 | 50.0 | 3.91e-01 | 73.8% | 33.8% |
| 3634173 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.72 | 48.0 | 3.58e-01 | 70.5% | 27.1% |
| 4351609 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.71 | 60.0 | 4.33e-01 | 100.0% | 88.4% |
| 4965929 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.70 | 49.0 | 3.05e-01 | 72.1% | 15.4% |
| 4023252 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.70 | 60.0 | 4.73e-01 | 100.0% | 45.4% |
| 3685453 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.70 | 60.0 | 4.15e-01 | 96.7% | 38.0% |
| 5061316 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.69 | 48.0 | 3.70e-01 | 72.1% | 34.6% |
| 3744012 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.69 | 51.0 | 3.16e-01 | 80.3% | 21.7% |
| 4979052 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 59.0 | 5.20e-01 | 96.7% | 83.3% |
| 2710376 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.68 | 46.0 | 3.46e-01 | 73.8% | 28.5% |
| 3460576 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.68 | 55.0 | 3.53e-01 | 88.5% | 20.0% |
| 3743823 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.67 | 56.0 | 3.95e-01 | 100.0% | 28.6% |
| 3527281 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.67 | 56.0 | 4.09e-01 | 100.0% | 32.4% |
| 3735309 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.67 | 39.0 | 3.45e-01 | 98.4% | 40.0% |
| None | — | 0.66 | 52.0 | 2.94e-01 | 86.9% | 73.5% | |
| 4962862 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.65 | 45.0 | 3.57e-01 | 72.1% | 35.2% |
| 3404941 | 220.1.1.15 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 | 0.65 | 53.0 | 3.89e-01 | 95.1% | 32.9% |
| 4962861 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.65 | 45.0 | 3.70e-01 | 73.8% | 40.0% |
| 5069591 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.64 | 55.0 | 4.18e-01 | 100.0% | 41.3% |
| 4528481 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.64 | 55.0 | 4.77e-01 | 100.0% | 98.0% |
| 3603591 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 53.0 | 3.27e-01 | 93.4% | 23.6% |
| 4965259 | 218.1.1.5 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MenC_N | 0.64 | 54.0 | 4.72e-01 | 100.0% | 98.0% |
| 4946011 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.64 | 44.0 | 3.59e-01 | 72.1% | 38.3% |
| 5045369 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.63 | 44.0 | 3.62e-01 | 72.1% | 40.0% |
| 3282536 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.63 | 54.0 | 5.02e-01 | 100.0% | 76.2% |
| 5019134 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.63 | 46.0 | 3.48e-01 | 78.7% | 34.0% |
| 4944528 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.63 | 43.0 | 3.36e-01 | 72.1% | 32.6% |
| 4963861 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.63 | 43.0 | 3.56e-01 | 72.1% | 40.0% |
| 3735671 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.62 | 54.0 | 4.64e-01 | 100.0% | 61.0% |
| 3352475 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.62 | 53.0 | 5.02e-01 | 100.0% | 84.0% |
| 1840644 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 45.0 | 3.72e-01 | 78.7% | 43.8% |
| 4937410 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.61 | 50.0 | 4.28e-01 | 100.0% | 56.8% |
| 3683658 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.61 | 51.0 | 3.18e-01 | 96.7% | 17.5% |
| 4880800 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.61 | 43.0 | 3.37e-01 | 73.8% | 36.5% |
| 4988348 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.60 | 51.0 | 3.32e-01 | 100.0% | 24.3% |
| 3663874 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.60 | 50.0 | 3.07e-01 | 96.7% | 15.6% |
| 3658408 | 4325.1.1.13 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF4371 | 0.60 | 51.0 | 4.79e-01 | 96.7% | 84.0% |
| 5082808 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.60 | 50.0 | 2.80e-01 | 98.4% | 31.4% |
| 3891434 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.60 | 51.0 | 4.02e-01 | 100.0% | 76.4% |
| 3913149 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.60 | 51.0 | 3.91e-01 | 100.0% | 70.7% |
| 3057969 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 47.0 | 3.27e-01 | 96.7% | 28.6% |
| 3211024 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.59 | 51.0 | 4.34e-01 | 100.0% | 59.0% |
| 3825504 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.59 | 50.0 | 4.49e-01 | 100.0% | 70.0% |
| 4946348 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.59 | 49.0 | 3.23e-01 | 98.4% | 71.2% |
| 418498 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.59 | 49.0 | 3.80e-01 | 100.0% | 71.8% |
| 5018331 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.58 | 40.0 | 2.66e-01 | 73.8% | 16.9% |
| 3267746 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.58 | 48.0 | 4.40e-01 | 100.0% | 68.2% |
| 5044807 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 40.0 | 3.67e-01 | 72.1% | 56.2% |
| 3797649 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 45.0 | 3.87e-01 | 100.0% | 50.9% |
| 3960269 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.57 | 39.0 | 2.95e-01 | 72.1% | 29.0% |
| 5061581 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.57 | 39.0 | 3.35e-01 | 73.8% | 47.3% |
| 3641990 | 295.1.1.39 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF4371 | 0.56 | 48.0 | 4.56e-01 | 100.0% | 81.3% |
| 3557121 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.56 | 42.0 | 4.05e-01 | 90.2% | 70.0% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.56 | 47.0 | 3.53e-01 | 100.0% | 42.4% |
| 3614175 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 36.0 | 3.00e-01 | 70.5% | 36.4% |
| 5048058 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.55 | 36.0 | 3.10e-01 | 70.5% | 38.2% |
| 4595466 | 3572.1.1.2 ↗ | a+b complex topology › Cascade subunit Csa5 › Cascade subunit Csa5 › Cascade subunit Csa5 › Cas_Csa5 | 0.54 | 39.0 | 3.16e-01 | 78.7% | 40.0% |
| 4980684 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 46.0 | 2.75e-01 | 100.0% | 42.4% |
| 3584285 | 5.1.11.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DPPIV_N | 0.53 | 43.0 | 2.70e-01 | 98.4% | 25.7% |
| 3622886 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 42.0 | 2.44e-01 | 98.4% | 13.9% |
| 5005613 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.52 | 35.0 | 2.81e-01 | 70.5% | 31.9% |
| 5059589 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.52 | 34.0 | 2.97e-01 | 70.5% | 39.1% |
| 3969410 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.51 | 42.0 | 3.50e-01 | 98.4% | 68.1% |
| 3711141 | 3662.1.1.1 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC3 | 0.51 | 44.0 | 3.38e-01 | 100.0% | 47.6% |