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IMGVR_UViG_3300033174_000338-3300033174-Ga0334882_100694915
Arc-VirIMGVR_UViG_3300033174_000338-3300033174-Ga0334882_100694915
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-23_38-80
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.80 | 72.0 | 6.12e-01 | 100.0% | 95.8% |
| 3qoqC00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.79 | 56.0 | 6.06e-01 | 75.0% | 93.9% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 50.0 | 5.13e-01 | 75.0% | 91.4% |
| 2is6A04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.63 | 45.0 | 3.31e-01 | 76.7% | 36.6% |
| 1vhxB00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.59 | 47.0 | 3.75e-01 | 93.3% | 97.1% |
| 6w72A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 3.61e-01 | 86.7% | 71.8% |
| 5f4bA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.58 | 48.0 | 3.58e-01 | 98.3% | 98.3% |
| 1w8iA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.57 | 46.0 | 3.54e-01 | 95.0% | 71.4% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.54 | 42.0 | 2.90e-01 | 88.3% | 95.4% |
| 3k32B00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 43.0 | 3.20e-01 | 100.0% | 60.7% |
| 4yrbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 3.18e-01 | 98.3% | 83.0% |
| 3jr7A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.53 | 45.0 | 3.60e-01 | 93.3% | 81.4% |
| 1ou0A00 | 3.40.50.10230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase | 0.53 | 44.0 | 3.11e-01 | 98.3% | 29.5% |
| 3fkeA01 | 1.10.8.950 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain | 0.53 | 40.0 | 3.90e-01 | 90.0% | 97.2% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.52 | 44.0 | 3.94e-01 | 98.3% | 70.0% |
| 4h15A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 2.78e-01 | 90.0% | 91.2% |
| 4lw8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 38.0 | 2.71e-01 | 81.7% | 89.4% |
| 2afrA00 | 3.40.50.10230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase | 0.52 | 45.0 | 3.05e-01 | 98.3% | 26.9% |
| 1pdoA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.52 | 41.0 | 3.33e-01 | 93.3% | 80.6% |
| 3bblA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 40.0 | 3.29e-01 | 95.0% | 86.2% |
| 3v46A00 | 3.40.50.11990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › RNA polymerase II accessory factor, Cdc73 C-terminal domain | 0.51 | 41.0 | 3.21e-01 | 96.7% | 95.0% |
| 4tkzA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.51 | 42.0 | 3.35e-01 | 95.0% | 93.8% |
| 3iprA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.51 | 41.0 | 3.28e-01 | 95.0% | 93.4% |
| 3mtqB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.50 | 41.0 | 3.27e-01 | 96.7% | 88.3% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050966 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.90 | 64.0 | 5.32e-01 | 73.3% | 46.3% |
| 3955892 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.89 | 60.0 | 6.59e-01 | 100.0% | 84.0% |
| 4937892 | 101.1.3.32 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › RHH_1 | 0.87 | 62.0 | 5.08e-01 | 100.0% | 44.0% |
| 5011906 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 57.0 | 5.93e-01 | 100.0% | 78.2% |
| 4946063 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 56.0 | 5.84e-01 | 100.0% | 78.2% |
| 2625223 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.78 | 55.0 | 5.74e-01 | 75.0% | 80.0% |
| 4486406 | 3430.1.1.1 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD | 0.69 | 52.0 | 4.25e-01 | 80.0% | 89.1% |
| 3507722 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.63 | 56.0 | 4.71e-01 | 100.0% | 60.0% |
| 3602858 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.63 | 54.0 | 4.68e-01 | 96.7% | 91.6% |
| 3515728 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.60 | 50.0 | 2.81e-01 | 90.0% | 14.0% |
| 5032086 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.59 | 50.0 | 3.58e-01 | 96.7% | 39.4% |
| 4937176 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.58 | 49.0 | 3.87e-01 | 95.0% | 80.0% |
| 4946981 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.58 | 42.0 | 2.93e-01 | 76.7% | 37.4% |
| 4933108 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.57 | 49.0 | 3.68e-01 | 100.0% | 53.8% |
| 4994134 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.57 | 48.0 | 3.52e-01 | 96.7% | 41.7% |
| 4993117 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 45.0 | 3.60e-01 | 96.7% | 52.5% |
| 5078327 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 46.0 | 3.66e-01 | 96.7% | 62.4% |
| 4966307 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 46.0 | 3.72e-01 | 96.7% | 92.8% |
| 5059447 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 45.0 | 3.57e-01 | 96.7% | 89.3% |
| 4971956 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.55 | 45.0 | 3.48e-01 | 96.7% | 49.7% |
| 5060069 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 45.0 | 3.65e-01 | 96.7% | 80.0% |
| 5032571 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 45.0 | 3.68e-01 | 95.0% | 81.7% |
| 4926845 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 45.0 | 3.69e-01 | 95.0% | 86.7% |
| 3554925 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.54 | 44.0 | 2.49e-01 | 93.3% | 57.6% |
| 4967672 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 45.0 | 3.53e-01 | 96.7% | 52.1% |
| 5078419 | 327.5.1.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › GH3_C | 0.54 | 43.0 | 3.41e-01 | 93.3% | 95.9% |
| 4970127 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 44.0 | 3.49e-01 | 96.7% | 90.0% |
| 5009857 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 43.0 | 3.51e-01 | 95.0% | 91.5% |
| 4984271 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 45.0 | 3.54e-01 | 96.7% | 88.6% |
| 5013586 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 44.0 | 3.47e-01 | 96.7% | 88.3% |
| 4938057 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 46.0 | 3.66e-01 | 100.0% | 92.3% |
| 4975539 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 41.0 | 3.14e-01 | 90.0% | 83.0% |
| 4992563 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.53 | 42.0 | 3.33e-01 | 91.7% | 69.1% |
| 5077880 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.53 | 43.0 | 3.43e-01 | 95.0% | 81.5% |
| 5032594 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.53 | 43.0 | 3.47e-01 | 95.0% | 80.5% |
| 5077581 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.53 | 43.0 | 3.45e-01 | 96.7% | 55.6% |
| 5076774 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 44.0 | 3.48e-01 | 100.0% | 95.0% |
| 4972774 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 43.0 | 3.44e-01 | 96.7% | 79.3% |
| 4968713 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.52 | 43.0 | 3.28e-01 | 96.7% | 66.3% |
| 4978168 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 44.0 | 3.48e-01 | 100.0% | 95.7% |
| 5081218 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 42.0 | 3.32e-01 | 93.3% | 77.9% |
| 4967880 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 42.0 | 3.46e-01 | 96.7% | 92.0% |
| 3696701 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.52 | 40.0 | 2.66e-01 | 96.7% | 66.0% |
| 4967814 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 42.0 | 3.36e-01 | 95.0% | 80.7% |
| 4992869 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 41.0 | 3.33e-01 | 95.0% | 79.9% |
| 4934254 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.51 | 42.0 | 3.35e-01 | 96.7% | 85.6% |
| 4987983 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.51 | 42.0 | 3.33e-01 | 96.7% | 89.9% |
| 5077686 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.51 | 43.0 | 3.35e-01 | 100.0% | 95.2% |
| 3587669 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.51 | 41.0 | 3.25e-01 | 95.0% | 91.4% |
| 372967 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.51 | 41.0 | 3.25e-01 | 95.0% | 91.4% |
| 4967817 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.51 | 40.0 | 3.36e-01 | 95.0% | 93.3% |
| 4982619 | 2006.1.4.36 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_3 | 0.50 | 41.0 | 3.31e-01 | 96.7% | 88.9% |
| 5032220 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.50 | 41.0 | 3.26e-01 | 95.0% | 79.3% |