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IMGVR_UViG_3300033178_000013-3300033178-Ga0334885_100127012
Arc-VirIMGVR_UViG_3300033178_000013-3300033178-Ga0334885_100127012
Identity
- Kingdom:
- archaea
Quality
89.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-89
Domain cluster:
rep: MH673673.1__AYJ73866.1__phiLo_14__00014__D6-82
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4esjA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 55.0 | 5.34e-01 | 98.8% | 74.4% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 5.21e-01 | 100.0% | 76.2% |
| 4p72A04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.70 | 42.0 | 4.34e-01 | 78.8% | 63.2% |
| 7bqjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 48.0 | 4.87e-01 | 100.0% | 71.6% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 4.77e-01 | 100.0% | 62.4% |
| 1zelA01 | 3.90.56.20 | Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › replication protein C, winged helix domain | 0.69 | 54.0 | 5.06e-01 | 100.0% | 68.4% |
| 4p9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 49.0 | 5.30e-01 | 100.0% | 89.6% |
| 6j0eB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 50.0 | 4.48e-01 | 98.8% | 53.8% |
| 1repC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 60.0 | 5.80e-01 | 98.8% | 92.3% |
| 1u5tB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 59.0 | 5.82e-01 | 98.8% | 94.1% |
| 4cgyA02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.67 | 51.0 | 3.92e-01 | 100.0% | 35.3% |
| 2bl0C01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.66 | 43.0 | 4.47e-01 | 93.8% | 70.7% |
| 6lbsB01 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.65 | 54.0 | 5.48e-01 | 100.0% | 93.7% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.99e-01 | 100.0% | 70.8% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.64 | 54.0 | 5.25e-01 | 100.0% | 86.4% |
| 5h0pA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 42.0 | 3.90e-01 | 93.8% | 53.9% |
| 6lcqA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.62 | 31.0 | 3.68e-01 | 85.0% | 68.5% |
| 3k21A02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.62 | 40.0 | 4.32e-01 | 93.8% | 79.4% |
| 3qrxA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 41.0 | 4.37e-01 | 91.3% | 80.9% |
| 2wv2A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 52.0 | 3.31e-01 | 97.5% | 73.6% |
| 4aimA03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 37.0 | 3.93e-01 | 78.8% | 70.4% |
| 3p04A00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.60 | 42.0 | 4.32e-01 | 98.8% | 76.6% |
| 2ixsA01 | 1.10.10.1820 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BsuBI/PstI restriction endonuclease, N-terminal domain | 0.60 | 52.0 | 4.26e-01 | 100.0% | 55.1% |
| 2pmyA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 39.0 | 4.11e-01 | 93.8% | 74.0% |
| 2mtfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 48.0 | 4.34e-01 | 100.0% | 65.8% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 35.0 | 3.24e-01 | 78.8% | 46.6% |
| 2d9iA00 | 3.30.1370.110 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 45.0 | 4.32e-01 | 100.0% | 75.0% |
| 3fvcA02 | 1.20.5.1890 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 40.0 | 3.79e-01 | 77.5% | 97.0% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.55 | 37.0 | 3.69e-01 | 77.5% | 66.3% |
| 1e7uA04 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.55 | 41.0 | 3.40e-01 | 83.7% | 89.9% |
| 4onyA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 47.0 | 3.21e-01 | 100.0% | 28.2% |
| 2d5wA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.54 | 46.0 | 4.10e-01 | 97.5% | 85.5% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.54 | 37.0 | 3.66e-01 | 72.5% | 83.7% |
| 2cxaA01 | 3.30.70.3550 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Leucyl/phenylalanyl-tRNA-protein transferase, N-terminal domain | 0.53 | 35.0 | 3.84e-01 | 97.5% | 88.3% |
| 6i3gA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.53 | 46.0 | 4.13e-01 | 100.0% | 76.3% |
| 4i5lB01 | 1.10.238.230 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.53 | 36.0 | 3.40e-01 | 98.8% | 57.0% |
| 5o5cB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 39.0 | 3.38e-01 | 91.3% | 50.8% |
| 4dcmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 36.0 | 2.97e-01 | 100.0% | 35.1% |
| 2qmaA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 38.0 | 3.34e-01 | 88.7% | 50.4% |
| 4iw7A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 35.0 | 3.14e-01 | 88.7% | 48.7% |
| 3l8nA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.51 | 37.0 | 3.77e-01 | 92.5% | 81.6% |
| 2qh9A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.51 | 38.0 | 3.00e-01 | 80.0% | 93.3% |
| 3dktA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.51 | 41.0 | 3.95e-01 | 100.0% | 76.8% |
| 4c0aA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.51 | 37.0 | 3.70e-01 | 91.3% | 77.8% |
| 7kz9B01 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.51 | 44.0 | 3.47e-01 | 100.0% | 59.0% |
| 1vkwA02 | 3.40.109.30 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › putative nitroreductase (tm1586), domain 2 | 0.51 | 40.0 | 3.77e-01 | 96.2% | 70.8% |
| 2grvA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.50 | 43.0 | 3.94e-01 | 100.0% | 85.8% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038689 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.95 | 89.0 | 8.10e-01 | 100.0% | 78.0% |
| 3476729 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.82 | 61.0 | 5.97e-01 | 98.8% | 71.6% |
| 3772634 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.81 | 61.0 | 6.14e-01 | 100.0% | 80.0% |
| 4927427 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 63.0 | 6.06e-01 | 100.0% | 74.4% |
| 3255111 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.78 | 58.0 | 6.28e-01 | 97.5% | 96.9% |
| 3382056 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 58.0 | 3.56e-01 | 100.0% | 14.2% |
| 3830447 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.76 | 60.0 | 6.02e-01 | 100.0% | 85.0% |
| 5060530 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 55.0 | 5.78e-01 | 100.0% | 84.9% |
| 3713972 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 59.0 | 5.26e-01 | 100.0% | 59.1% |
| 5077611 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 56.0 | 4.84e-01 | 100.0% | 51.2% |
| 3507464 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.74 | 58.0 | 5.76e-01 | 100.0% | 81.0% |
| 5063930 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 59.0 | 5.68e-01 | 100.0% | 76.7% |
| 4991791 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 61.0 | 5.78e-01 | 100.0% | 75.8% |
| 3364025 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.72 | 54.0 | 3.60e-01 | 100.0% | 21.0% |
| 3409254 | 101.1.2.393 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_MCM2 | 0.71 | 58.0 | 5.90e-01 | 98.8% | 90.0% |
| 3274016 | 101.1.2.393 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_MCM2 | 0.71 | 59.0 | 5.95e-01 | 98.8% | 91.3% |
| 3379132 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.71 | 53.0 | 3.47e-01 | 100.0% | 19.1% |
| 4987122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 50.0 | 5.45e-01 | 97.5% | 93.8% |
| 5064032 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 52.0 | 5.45e-01 | 100.0% | 91.4% |
| 5032410 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 5.56e-01 | 100.0% | 86.3% |
| 3187002 | 101.1.2.635 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C, PF26121 | 0.69 | 61.0 | 4.12e-01 | 100.0% | 26.8% |
| 3946059 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.69 | 60.0 | 5.82e-01 | 98.8% | 86.7% |
| 3786023 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.69 | 56.0 | 4.07e-01 | 100.0% | 30.8% |
| 3370387 | 101.1.2.393 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_MCM2 | 0.69 | 57.0 | 5.76e-01 | 97.5% | 91.3% |
| 3638163 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.68 | 56.0 | 5.12e-01 | 100.0% | 68.2% |
| 4934021 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 52.0 | 4.61e-01 | 100.0% | 55.8% |
| 3383404 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.67 | 55.0 | 5.11e-01 | 100.0% | 70.2% |
| 3270341 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 52.0 | 4.99e-01 | 100.0% | 71.6% |
| 3445779 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.67 | 52.0 | 4.49e-01 | 100.0% | 53.6% |
| 3717644 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.67 | 39.0 | 4.06e-01 | 76.2% | 61.3% |
| 3414623 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.67 | 55.0 | 3.74e-01 | 100.0% | 24.7% |
| 4334068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 59.0 | 5.70e-01 | 100.0% | 88.9% |
| 3479237 | 108.1.1.98 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 | 0.67 | 48.0 | 5.06e-01 | 100.0% | 85.7% |
| 5082316 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.67 | 59.0 | 5.59e-01 | 98.8% | 87.4% |
| 3218171 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 40.0 | 4.14e-01 | 78.8% | 64.0% |
| 4563576 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.65 | 56.0 | 5.38e-01 | 98.8% | 84.2% |
| 4947850 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 59.0 | 5.37e-01 | 100.0% | 79.0% |
| 3723823 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 56.0 | 5.49e-01 | 100.0% | 90.0% |
| 3393539 | 101.1.2.33 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_beta | 0.65 | 51.0 | 5.23e-01 | 100.0% | 93.3% |
| 3412336 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 52.0 | 5.18e-01 | 98.8% | 84.7% |
| 3932726 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 53.0 | 3.79e-01 | 100.0% | 30.0% |
| 3934188 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.63 | 54.0 | 4.66e-01 | 100.0% | 61.6% |
| 3676148 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.62 | 52.0 | 4.54e-01 | 100.0% | 60.0% |
| 3305861 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.19e-01 | 100.0% | 51.9% |
| 5051554 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 50.0 | 5.08e-01 | 100.0% | 92.5% |
| 3504003 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.61 | 43.0 | 3.92e-01 | 93.8% | 55.8% |
| 3277489 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.61 | 43.0 | 4.04e-01 | 93.8% | 61.1% |
| 3705225 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.61 | 43.0 | 4.49e-01 | 100.0% | 80.0% |
| 4025053 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.61 | 53.0 | 5.08e-01 | 100.0% | 89.5% |
| 3476119 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.61 | 47.0 | 4.66e-01 | 100.0% | 78.8% |
| 3264275 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 52.0 | 4.83e-01 | 100.0% | 80.0% |
| 3927851 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.57e-01 | 100.0% | 73.0% |
| 4003894 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.60 | 42.0 | 3.19e-01 | 93.8% | 31.4% |
| 3932668 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 45.0 | 4.43e-01 | 100.0% | 78.8% |
| 3580220 | 108.1.1.103 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6, EF-hand_7, EF-hand_8 | 0.59 | 45.0 | 3.53e-01 | 100.0% | 37.2% |
| 3270755 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.59 | 39.0 | 4.23e-01 | 97.5% | 86.2% |
| 3785728 | 101.1.2.118 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dcc1 | 0.59 | 41.0 | 4.43e-01 | 97.5% | 92.2% |
| 3866484 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.59 | 41.0 | 3.68e-01 | 93.8% | 52.7% |
| 3999923 | 108.1.1.32 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_10 | 0.58 | 41.0 | 3.03e-01 | 98.8% | 27.4% |
| 3875119 | 108.1.1.66 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_PLCG1 | 0.58 | 39.0 | 3.90e-01 | 93.8% | 65.9% |
| 4412832 | 108.1.1.50 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › Rad33 | 0.57 | 44.0 | 3.49e-01 | 95.0% | 40.0% |
| 3256995 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.57 | 38.0 | 4.08e-01 | 95.0% | 78.6% |
| 3477187 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 43.0 | 3.68e-01 | 100.0% | 50.8% |
| 4026000 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 4.17e-01 | 100.0% | 84.0% |
| 3407438 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 43.0 | 3.95e-01 | 98.8% | 63.8% |
| 3532620 | 108.1.1.66 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_PLCG1 | 0.56 | 39.0 | 3.72e-01 | 93.8% | 61.1% |
| 4369040 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.56 | 42.0 | 3.89e-01 | 98.8% | 62.9% |
| 4084695 | 108.1.1.201 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF_HAND_1_PLCG, EF_HAND_2_PLCG | 0.55 | 42.0 | 3.35e-01 | 93.8% | 38.3% |
| 4506359 | 101.1.2.751 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6293_C | 0.55 | 44.0 | 4.34e-01 | 100.0% | 84.7% |
| 1514558 | 304.136.1.1 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SBP_bac_5 | 0.55 | 46.0 | 4.30e-01 | 96.2% | 83.8% |
| 3493536 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 49.0 | 4.31e-01 | 100.0% | 71.3% |
| 3407327 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.54 | 40.0 | 4.04e-01 | 98.8% | 78.8% |
| 3312541 | 108.1.1.1 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 | 0.53 | 37.0 | 3.71e-01 | 97.5% | 71.2% |
| 3607306 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 38.0 | 3.61e-01 | 97.5% | 63.2% |
| 3593166 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 40.0 | 3.57e-01 | 98.8% | 56.5% |
| 3890966 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 35.0 | 3.58e-01 | 97.5% | 68.8% |
| 3886510 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.52 | 40.0 | 2.89e-01 | 98.8% | 26.2% |
| 3595418 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 44.0 | 4.19e-01 | 100.0% | 78.0% |
| 3699958 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 37.0 | 3.84e-01 | 97.5% | 80.0% |
| 3609384 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 41.0 | 3.78e-01 | 97.5% | 65.7% |
| 3888886 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.52 | 40.0 | 2.80e-01 | 98.8% | 24.3% |
| 5054480 | 3110.1.1.2 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3-PglB_core | 0.52 | 45.0 | 3.74e-01 | 100.0% | 54.9% |
| 2087883 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.51 | 39.0 | 3.89e-01 | 100.0% | 82.4% |
| 3704485 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.50 | 43.0 | 4.05e-01 | 100.0% | 78.0% |
| 3505390 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.50 | 44.0 | 3.59e-01 | 98.8% | 75.5% |
D2
high
residues 104-251
Domain cluster:
rep: MN698246.1__QGZ18180.1__HTVC112P_gp03__00003__D120-243
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cxhA01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.72 | 40.0 | 3.79e-01 | 87.8% | 46.0% |
| 4hn3A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.71 | 60.0 | 4.56e-01 | 89.2% | 72.6% |
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.69 | 59.0 | 4.59e-01 | 92.6% | 76.1% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.62 | 29.0 | 3.77e-01 | 95.9% | 78.5% |
| 2hqsA01 | 3.40.50.10070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain | 0.61 | 40.0 | 4.07e-01 | 89.2% | 66.9% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.60 | 47.0 | 4.18e-01 | 81.1% | 77.7% |
| 4dapA02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 49.0 | 4.88e-01 | 89.2% | 95.4% |
| 4i43B04 | 3.90.1570.40 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › Pre-mRNA-processing-splicing factor 8 (Prp8), endonuclease domain | 0.58 | 48.0 | 4.60e-01 | 89.2% | 91.3% |
| 3iayA01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 32.0 | 3.92e-01 | 74.3% | 85.7% |
| 1tx3D00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.55 | 48.0 | 4.10e-01 | 95.3% | 81.1% |
| 3ndhA00 | 3.40.600.30 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › | 0.55 | 50.0 | 4.44e-01 | 100.0% | 82.2% |
| 1ivyB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 39.0 | 2.79e-01 | 73.6% | 92.2% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 36.0 | 3.84e-01 | 71.6% | 77.1% |
| 3ngqA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.53 | 46.0 | 3.63e-01 | 98.6% | 96.4% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.52 | 27.0 | 3.35e-01 | 81.8% | 80.7% |
| 1mu5A01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 36.0 | 3.23e-01 | 70.9% | 62.9% |
| 4yt9A01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.50 | 39.0 | 3.00e-01 | 80.4% | 86.7% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 27.0 | 3.05e-01 | 76.4% | 66.4% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038690 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.98 | 96.0 | 9.30e-01 | 100.0% | 92.5% |
| 5080739 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 64.0 | 5.37e-01 | 85.1% | 63.4% |
| 3172160 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.73 | 62.0 | 5.22e-01 | 88.5% | 71.9% |
| 5033908 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.73 | 56.0 | 5.02e-01 | 80.4% | 67.3% |
| 4929251 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.73 | 55.0 | 5.01e-01 | 81.1% | 60.0% |
| 3414564 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.72 | 60.0 | 4.79e-01 | 88.5% | 57.9% |
| 3945875 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 54.0 | 5.60e-01 | 88.5% | 83.6% |
| 4932843 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.69 | 57.0 | 4.79e-01 | 87.2% | 62.0% |
| 5066595 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.69 | 53.0 | 4.81e-01 | 80.4% | 63.4% |
| 4950791 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.67 | 52.0 | 4.96e-01 | 81.1% | 76.6% |
| 4964811 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.67 | 56.0 | 4.61e-01 | 87.8% | 61.0% |
| 3210459 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 55.0 | 5.14e-01 | 89.2% | 98.9% |
| 4358674 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.64 | 40.0 | 4.51e-01 | 89.9% | 82.7% |
| 3838560 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.63 | 52.0 | 4.75e-01 | 88.5% | 70.8% |
| 3226662 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.62 | 37.0 | 3.25e-01 | 87.2% | 37.8% |
| 4530988 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.62 | 39.0 | 4.30e-01 | 87.2% | 77.5% |
| 4642685 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.62 | 38.0 | 4.10e-01 | 87.8% | 71.2% |
| 3603282 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.62 | 44.0 | 4.34e-01 | 72.3% | 81.9% |
| 4973776 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.62 | 52.0 | 5.18e-01 | 89.2% | 89.3% |
| 5077023 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.61 | 51.0 | 4.97e-01 | 91.2% | 79.4% |
| 4963533 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.61 | 47.0 | 5.13e-01 | 88.5% | 98.3% |
| 4416484 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.61 | 39.0 | 4.31e-01 | 89.2% | 79.2% |
| 4494448 | 2008.1.1.183 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27227 | 0.61 | 47.0 | 4.97e-01 | 94.6% | 88.9% |
| 4262608 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.60 | 39.0 | 4.38e-01 | 86.5% | 87.3% |
| 4639186 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.60 | 38.0 | 3.78e-01 | 87.8% | 59.4% |
| 4942149 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 51.0 | 5.03e-01 | 97.3% | 87.7% |
| 5070502 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 49.0 | 5.04e-01 | 87.8% | 97.2% |
| 4545906 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.59 | 37.0 | 3.86e-01 | 87.2% | 66.4% |
| 5028573 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 48.0 | 4.91e-01 | 85.1% | 90.7% |
| 4670897 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.59 | 36.0 | 3.71e-01 | 87.2% | 64.3% |
| 4936462 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.58 | 47.0 | 4.67e-01 | 89.2% | 81.3% |
| 4947491 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 48.0 | 4.68e-01 | 89.2% | 80.6% |
| 5033655 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.54 | 33.0 | 4.07e-01 | 71.6% | 98.9% |
| 3610562 | 2492.1.1.11 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NPL4 | 0.54 | 47.0 | 4.04e-01 | 95.3% | 80.0% |
| 3588355 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.53 | 29.0 | 3.44e-01 | 85.1% | 77.0% |
| 3822890 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.53 | 32.0 | 3.37e-01 | 74.3% | 64.3% |
| 3827585 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.52 | 31.0 | 3.70e-01 | 74.3% | 85.7% |
| 3733455 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.51 | 25.0 | 2.94e-01 | 79.7% | 62.9% |
| 2557291 | 7575.1.1.4 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 | 0.50 | 41.0 | 3.12e-01 | 85.8% | 83.1% |
| 3248027 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.50 | 43.0 | 2.99e-01 | 91.9% | 30.5% |
| 3270997 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.50 | 45.0 | 3.53e-01 | 99.3% | 93.5% |