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IMGVR_UViG_3300033178_000167-3300033178-Ga0334885_100145855
Arc-VirIMGVR_UViG_3300033178_000167-3300033178-Ga0334885_100145855
Identity
- Kingdom:
- archaea
Quality
58.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 135-292
D2
high
residues 306-388
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.63 | 35.0 | 3.55e-01 | 81.9% | 53.6% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 47.0 | 4.10e-01 | 79.5% | 72.9% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 44.0 | 3.24e-01 | 74.7% | 88.7% |
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.60 | 34.0 | 3.42e-01 | 83.1% | 54.1% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.59 | 34.0 | 3.44e-01 | 81.9% | 54.7% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 36.0 | 3.51e-01 | 74.7% | 56.8% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.57 | 36.0 | 3.77e-01 | 90.4% | 70.3% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 50.0 | 3.42e-01 | 97.6% | 46.6% |
| 3qi7A03 | 3.30.30.130 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.55 | 30.0 | 3.55e-01 | 72.3% | 91.1% |
| 1repC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 4.19e-01 | 84.3% | 90.1% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.54 | 32.0 | 3.76e-01 | 73.5% | 86.0% |
| 6kd0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 42.0 | 2.84e-01 | 83.1% | 85.4% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.54 | 39.0 | 3.33e-01 | 78.3% | 69.4% |
| 1qlmA02 | 3.30.1030.10 | Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 | 0.54 | 37.0 | 2.84e-01 | 72.3% | 99.0% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 40.0 | 3.69e-01 | 81.9% | 67.9% |
| 2qzbA00 | 2.60.460.10 | Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain | 0.53 | 47.0 | 3.90e-01 | 97.6% | 100.0% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.85e-01 | 95.2% | 80.0% |
| 3iylW02 | 3.55.60.10 | Alpha Beta › 3-Layer(bab) Sandwich › Reovirus components fold › Reovirus components | 0.53 | 39.0 | 3.29e-01 | 80.7% | 81.8% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 3.34e-01 | 98.8% | 94.2% |
| 2rcqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 3.61e-01 | 95.2% | 80.1% |
| 6u26A01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.51 | 41.0 | 4.10e-01 | 90.4% | 92.0% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.50 | 37.0 | 3.73e-01 | 83.1% | 79.3% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 43.0 | 3.12e-01 | 100.0% | 80.0% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 35.0 | 3.64e-01 | 83.1% | 81.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942072 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.79 | 70.0 | 5.49e-01 | 96.4% | 50.0% |
| 4980573 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.78 | 72.0 | 5.39e-01 | 100.0% | 56.8% |
| 4979181 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.78 | 70.0 | 5.38e-01 | 100.0% | 51.9% |
| 4978783 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 70.0 | 5.72e-01 | 100.0% | 62.7% |
| 5031828 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.76 | 69.0 | 5.23e-01 | 100.0% | 55.3% |
| 5061404 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.76 | 69.0 | 4.60e-01 | 100.0% | 27.9% |
| 5033159 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 64.0 | 4.39e-01 | 100.0% | 30.4% |
| 5060170 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.70 | 63.0 | 4.23e-01 | 100.0% | 28.6% |
| 3661102 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.62 | 40.0 | 4.66e-01 | 90.4% | 98.2% |
| 3491344 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 30.0 | 3.05e-01 | 78.3% | 47.6% |
| 3283943 | 304.8.1.80 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF6196 | 0.58 | 37.0 | 3.95e-01 | 75.9% | 75.7% |
| 4948613 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.57 | 51.0 | 3.61e-01 | 96.4% | 79.8% |
| 5068574 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.57 | 50.0 | 3.40e-01 | 97.6% | 70.7% |
| 3615641 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 39.0 | 3.90e-01 | 72.3% | 77.6% |
| 3592741 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 38.0 | 3.87e-01 | 72.3% | 77.6% |
| 4819807 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.56 | 39.0 | 4.03e-01 | 84.3% | 78.2% |
| 3206115 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 37.0 | 4.02e-01 | 80.7% | 84.3% |
| 4931923 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.55 | 41.0 | 4.17e-01 | 100.0% | 80.0% |
| 4525115 | 873.1.1.15 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27323 | 0.54 | 42.0 | 3.68e-01 | 84.3% | 68.5% |
| 3969151 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.54 | 41.0 | 4.23e-01 | 95.2% | 82.5% |
| 4247992 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.54 | 41.0 | 4.10e-01 | 91.6% | 77.6% |
| 3209385 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 36.0 | 4.01e-01 | 71.1% | 92.3% |
| 3234330 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 37.0 | 3.40e-01 | 72.3% | 80.9% |
| 3965385 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.53 | 40.0 | 4.39e-01 | 96.4% | 95.7% |
| 4658611 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.53 | 40.0 | 3.81e-01 | 88.0% | 67.0% |
| 3345277 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.52 | 45.0 | 2.96e-01 | 100.0% | 71.0% |
| 3402001 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 40.0 | 3.98e-01 | 84.3% | 83.3% |
| 4995222 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.52 | 37.0 | 3.90e-01 | 80.7% | 84.0% |
| 5023262 | 327.11.2.82 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27275 | 0.51 | 30.0 | 3.35e-01 | 88.0% | 72.3% |
| 5063075 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.51 | 45.0 | 3.31e-01 | 100.0% | 89.4% |
| 3921260 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 38.0 | 3.38e-01 | 81.9% | 55.0% |
| 4972691 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.51 | 39.0 | 3.65e-01 | 100.0% | 67.0% |
| 4147949 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.51 | 40.0 | 2.59e-01 | 86.7% | 24.4% |
| 3308699 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.51 | 39.0 | 3.58e-01 | 83.1% | 81.8% |