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IMGVR_UViG_3300033388_002469-3300033388-Ga0370355_10033597
Arc-VirIMGVR_UViG_3300033388_002469-3300033388-Ga0370355_10033597
Identity
- Kingdom:
- archaea
Quality
74.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 117-182
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13573.13 best | SprB | 39.9 | 3.60e-10 | 54.5% | 75.7% |
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jguA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.79 | 71.0 | 6.29e-01 | 100.0% | 84.2% |
| 2c4xA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.78 | 70.0 | 6.20e-01 | 100.0% | 87.2% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.78 | 70.0 | 6.19e-01 | 100.0% | 95.8% |
| 2oxgC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.77 | 68.0 | 5.93e-01 | 100.0% | 95.0% |
| 1f00I02 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.77 | 69.0 | 6.21e-01 | 100.0% | 96.6% |
| 2vr3B02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.76 | 67.0 | 5.14e-01 | 100.0% | 94.8% |
| 4qycB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.76 | 63.0 | 5.48e-01 | 90.9% | 99.0% |
| 2pndA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.76 | 67.0 | 5.54e-01 | 100.0% | 95.0% |
| 2qsqB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.76 | 67.0 | 5.65e-01 | 98.5% | 96.3% |
| 5irbA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.75 | 66.0 | 5.73e-01 | 100.0% | 93.3% |
| 6v3pD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.75 | 66.0 | 5.81e-01 | 100.0% | 97.0% |
| 2ox5B00 | 2.60.40.2470 | Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain | 0.74 | 66.0 | 5.60e-01 | 100.0% | 77.3% |
| 3gm8A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 64.0 | 5.40e-01 | 100.0% | 96.4% |
| 2p9rA00 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.72 | 63.0 | 5.51e-01 | 100.0% | 91.2% |
| 2yrlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 60.0 | 5.55e-01 | 92.4% | 95.2% |
| 4aq1A02 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.71 | 63.0 | 5.70e-01 | 100.0% | 94.5% |
| 5euvA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 63.0 | 5.65e-01 | 100.0% | 98.9% |
| 6s5wA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 63.0 | 5.56e-01 | 100.0% | 96.9% |
| 1wgoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 61.0 | 5.44e-01 | 100.0% | 88.9% |
| 5i8dA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.71 | 62.0 | 5.25e-01 | 100.0% | 90.2% |
| 2l3bA00 | 2.60.40.2410 | Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein PF12988, DUF3872 | 0.71 | 61.0 | 4.98e-01 | 100.0% | 77.7% |
| 2fauA02 | 2.60.40.640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 59.0 | 4.80e-01 | 100.0% | 82.5% |
| 2pn5A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 61.0 | 5.51e-01 | 100.0% | 95.7% |
| 4r7vA00 | 2.60.40.640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 60.0 | 4.69e-01 | 100.0% | 89.9% |
| 2zotC00 | 2.60.40.4060 | Mainly Beta › Sandwich › Immunoglobulin-like › Reeler domain | 0.69 | 60.0 | 4.74e-01 | 100.0% | 87.9% |
| 3d33A00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 60.0 | 5.38e-01 | 100.0% | 88.3% |
| 1cidA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 59.0 | 5.81e-01 | 97.0% | 100.0% |
| 2kpnA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 59.0 | 5.68e-01 | 100.0% | 92.2% |
| 5iryA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.67 | 55.0 | 5.14e-01 | 92.4% | 97.6% |
| 6s5xA01 | 2.60.40.3600 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 59.0 | 5.67e-01 | 100.0% | 90.7% |
| 4aq1A03 | 2.60.40.3440 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 58.0 | 4.81e-01 | 97.0% | 90.4% |
| 8egxA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.66 | 55.0 | 4.93e-01 | 100.0% | 100.0% |
| 6cxhA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.66 | 57.0 | 4.57e-01 | 100.0% | 94.1% |
| 3bc9A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 55.0 | 4.99e-01 | 98.5% | 97.8% |
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.63 | 54.0 | 4.97e-01 | 100.0% | 88.9% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 45.0 | 3.48e-01 | 75.8% | 36.8% |
| 3dorA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.63 | 44.0 | 3.79e-01 | 74.2% | 94.4% |
| 3cmgA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 52.0 | 4.89e-01 | 100.0% | 90.8% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.60 | 46.0 | 2.89e-01 | 83.3% | 19.7% |
| 3moiA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 50.0 | 3.61e-01 | 100.0% | 42.7% |
| 3db2B02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 49.0 | 3.57e-01 | 100.0% | 43.8% |
| 3q2iA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 48.0 | 3.69e-01 | 100.0% | 54.9% |
| 3qvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 44.0 | 3.85e-01 | 87.9% | 99.0% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 40.0 | 3.22e-01 | 80.3% | 74.6% |
| 4hj1A01 | 2.60.98.50 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › | 0.54 | 40.0 | 3.15e-01 | 84.8% | 60.2% |
| 3cinA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 43.0 | 3.72e-01 | 87.9% | 97.1% |
| 1zh8A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 45.0 | 3.42e-01 | 100.0% | 49.5% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 40.0 | 4.32e-01 | 78.8% | 92.9% |
| 3rwxA01 | 2.40.128.340 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 44.0 | 3.68e-01 | 98.5% | 85.0% |
| 5g5gB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.51 | 43.0 | 3.93e-01 | 100.0% | 76.6% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 32.0 | 2.64e-01 | 98.5% | 33.1% |
| 1vq0A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.51 | 39.0 | 2.80e-01 | 89.4% | 99.6% |
| 2gshA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 38.0 | 2.99e-01 | 86.4% | 88.9% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4985870 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.81 | 72.0 | 6.29e-01 | 97.0% | 80.0% |
| 5060899 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.79 | 72.0 | 6.59e-01 | 100.0% | 89.4% |
| 5080434 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.79 | 70.0 | 6.17e-01 | 98.5% | 96.8% |
| 5061009 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.78 | 69.0 | 6.14e-01 | 100.0% | 94.7% |
| 3891892 | 11.1.1.351 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD | 0.78 | 70.0 | 5.86e-01 | 100.0% | 94.5% |
| 5034528 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.77 | 67.0 | 6.21e-01 | 97.0% | 97.6% |
| 3630668 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 68.0 | 5.64e-01 | 100.0% | 94.8% |
| 5080943 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 68.0 | 6.41e-01 | 100.0% | 92.5% |
| 3604413 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.76 | 66.0 | 6.23e-01 | 97.0% | 98.8% |
| 5083566 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.76 | 68.0 | 6.26e-01 | 100.0% | 94.1% |
| 3579582 | 3414.1.1.6 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › HYR | 0.74 | 67.0 | 6.14e-01 | 100.0% | 90.6% |
| 1559083 | 11.1.1.248 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG6 | 0.74 | 66.0 | 5.31e-01 | 100.0% | 87.2% |
| 3508657 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.73 | 65.0 | 4.56e-01 | 100.0% | 61.9% |
| 3797667 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 62.0 | 5.92e-01 | 100.0% | 93.8% |
| 3781575 | 11.1.1.498 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LDB19 | 0.72 | 62.0 | 4.68e-01 | 98.5% | 87.3% |
| 3927937 | 11.1.1.533 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYR | 0.71 | 62.0 | 5.91e-01 | 100.0% | 92.5% |
| 3743199 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 63.0 | 5.13e-01 | 100.0% | 92.8% |
| 3388495 | 3414.1.1.6 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › HYR | 0.71 | 61.0 | 5.89e-01 | 97.0% | 92.0% |
| 3238842 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 63.0 | 4.98e-01 | 100.0% | 84.4% |
| 4083039 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 63.0 | 5.26e-01 | 100.0% | 95.7% |
| 5016736 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 60.0 | 5.28e-01 | 100.0% | 97.1% |
| 1813078 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.70 | 60.0 | 5.13e-01 | 100.0% | 92.0% |
| 3064463 | 6107.1.1.1 ↗ | a+b two layers › a+b domain in platelet binding protein GspB › a+b domain in platelet binding protein GspB › a+b domain in platelet binding protein GspB › Rib | 0.70 | 62.0 | 5.43e-01 | 100.0% | 89.8% |
| 5039465 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.69 | 55.0 | 4.66e-01 | 84.8% | 75.2% |
| 5081599 | 11.1.1.1410 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CarboxypepD_reg | 0.69 | 55.0 | 5.34e-01 | 87.9% | 94.7% |
| 3584255 | 11.1.1.898 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_16th | 0.69 | 60.0 | 5.83e-01 | 98.5% | 94.7% |
| 3996413 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 61.0 | 5.84e-01 | 98.5% | 93.3% |
| 3595756 | 11.1.1.60 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 | 0.68 | 59.0 | 4.45e-01 | 100.0% | 71.8% |
| 3416339 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 59.0 | 4.93e-01 | 100.0% | 93.3% |
| None | — | 0.67 | 60.0 | 5.62e-01 | 100.0% | 88.7% | |
| 5061499 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 57.0 | 5.74e-01 | 100.0% | 96.9% |
| 3247908 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 56.0 | 5.41e-01 | 97.0% | 100.0% |
| 4108633 | 11.1.1.608 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail | 0.64 | 56.0 | 5.55e-01 | 98.5% | 100.0% |
| 5053021 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.63 | 43.0 | 3.95e-01 | 72.7% | 84.4% |
| 4389388 | 848.1.1.1 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 | 0.58 | 49.0 | 3.42e-01 | 98.5% | 93.5% |
| 142098 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.56 | 48.0 | 3.79e-01 | 100.0% | 60.1% |
| 142096 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.56 | 47.0 | 3.77e-01 | 100.0% | 59.7% |
| 4998578 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.56 | 48.0 | 3.71e-01 | 100.0% | 54.4% |
| 1949187 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.56 | 48.0 | 3.76e-01 | 100.0% | 55.9% |
| 3787659 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.56 | 47.0 | 3.54e-01 | 100.0% | 48.1% |
| 3599943 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.55 | 46.0 | 4.33e-01 | 93.9% | 96.2% |
| 5036467 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.54 | 45.0 | 3.51e-01 | 100.0% | 54.5% |
| 6776 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.54 | 45.0 | 3.65e-01 | 100.0% | 62.5% |
| 5052057 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.54 | 41.0 | 3.10e-01 | 83.3% | 90.0% |
| 5068388 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.53 | 32.0 | 3.50e-01 | 98.5% | 72.7% |
| 5025388 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.53 | 45.0 | 3.43e-01 | 100.0% | 48.6% |
| 5013227 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.53 | 45.0 | 2.97e-01 | 100.0% | 27.7% |
| 3355345 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 37.0 | 3.64e-01 | 100.0% | 71.4% |
| 5038844 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.52 | 40.0 | 3.83e-01 | 86.4% | 81.2% |
| 4887510 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.51 | 41.0 | 3.79e-01 | 98.5% | 67.9% |
| 3711062 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 39.0 | 3.54e-01 | 89.4% | 73.0% |
| 5043294 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.50 | 41.0 | 3.28e-01 | 89.4% | 57.7% |
| 3595983 | 3186.1.1.0 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK | 0.50 | 40.0 | 3.81e-01 | 97.0% | 95.2% |
D2
high
residues 189-259
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00754__D505-572
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13573.13 best | SprB | 45.8 | 5.10e-12 | 47.9% | 70.3% |
D3
medium
residues 18-77