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IMGVR_UViG_3300033388_005792-3300033388-Ga0370355_100102421
Arc-VirIMGVR_UViG_3300033388_005792-3300033388-Ga0370355_100102421
Identity
- Kingdom:
- archaea
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 55-96
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lslA01 | 2.20.100.10 | Mainly Beta › Single Sheet › TSP-1 type 1 repeat › Thrombospondin type-1 (TSP1) repeat | 0.77 | 68.0 | 6.18e-01 | 100.0% | 83.9% |
| 3up1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 55.0 | 4.23e-01 | 100.0% | 59.6% |
| 3lhoA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.61 | 47.0 | 2.99e-01 | 100.0% | 15.1% |
| 6ci7A01 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 45.0 | 3.33e-01 | 100.0% | 29.5% |
| 3e5dA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 44.0 | 3.24e-01 | 100.0% | 27.2% |
| 5c2vB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 49.0 | 2.89e-01 | 95.2% | 12.8% |
| 6w1kA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.59 | 48.0 | 3.00e-01 | 100.0% | 15.5% |
| 3q63F00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 41.0 | 2.90e-01 | 73.8% | 78.4% |
| 4ifsA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.59 | 50.0 | 3.60e-01 | 100.0% | 34.1% |
| 3s98A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 3.92e-01 | 100.0% | 65.6% |
| 3vgzC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 45.0 | 2.73e-01 | 95.2% | 12.1% |
| 4jklA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 3.68e-01 | 100.0% | 57.9% |
| 3wcyA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 45.0 | 3.74e-01 | 100.0% | 65.1% |
| 7vbnL01 | 3.30.160.190 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain | 0.56 | 42.0 | 3.48e-01 | 92.9% | 60.0% |
| 2hqlA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 45.0 | 3.60e-01 | 95.2% | 42.9% |
| 3lmbA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 44.0 | 3.15e-01 | 100.0% | 52.9% |
| 2g9gA00 | 2.60.120.1020 | Mainly Beta › Sandwich › Jelly Rolls › PAW domain | 0.55 | 36.0 | 2.41e-01 | 100.0% | 14.3% |
| 5mj3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.62e-01 | 100.0% | 69.0% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.54 | 44.0 | 3.09e-01 | 95.2% | 30.6% |
| 2vqpA01 | 2.70.20.30 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › HRSV-S2 matrix protein, N-terminal domain | 0.53 | 38.0 | 3.02e-01 | 100.0% | 32.5% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 44.0 | 3.96e-01 | 100.0% | 66.7% |
| 1w7cA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.29e-01 | 100.0% | 40.9% |
| 4wz9A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 42.0 | 3.46e-01 | 97.6% | 73.9% |
| 3k50A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 41.0 | 3.26e-01 | 97.6% | 46.0% |
| 4zk3A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 40.0 | 3.07e-01 | 100.0% | 59.1% |
| 4n2cA02 | 2.60.40.1700 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, central domain | 0.51 | 39.0 | 2.71e-01 | 92.9% | 34.7% |
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.51 | 40.0 | 3.07e-01 | 100.0% | 34.7% |
| 1b44D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 35.0 | 2.81e-01 | 100.0% | 30.2% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.50 | 37.0 | 2.75e-01 | 100.0% | 25.4% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 38.0 | 2.30e-01 | 95.2% | 10.2% |
| 4ioyX01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.50 | 40.0 | 3.03e-01 | 100.0% | 35.2% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4228067 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.94 | 88.0 | 7.41e-01 | 100.0% | 69.2% |
| 3993292 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.93 | 87.0 | 7.55e-01 | 100.0% | 83.3% |
| 3515375 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.92 | 87.0 | 7.30e-01 | 100.0% | 87.7% |
| 3777264 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.92 | 83.0 | 5.43e-01 | 97.6% | 28.6% |
| 3931163 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.91 | 83.0 | 7.46e-01 | 97.6% | 89.1% |
| 3522584 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.91 | 84.0 | 7.34e-01 | 100.0% | 83.3% |
| 3904378 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.90 | 83.0 | 7.48e-01 | 100.0% | 90.9% |
| 3915731 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.90 | 83.0 | 5.46e-01 | 100.0% | 34.0% |
| 3858016 | 922.1.1.27 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin, TSP1_ADAMTS | 0.88 | 79.0 | 5.50e-01 | 100.0% | 37.6% |
| 3226890 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.86 | 77.0 | 7.26e-01 | 100.0% | 92.0% |
| 3865167 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.85 | 78.0 | 6.84e-01 | 100.0% | 83.3% |
| 3539180 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.85 | 78.0 | 6.85e-01 | 100.0% | 83.3% |
| 3760912 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.84 | 75.0 | 7.09e-01 | 100.0% | 88.0% |
| 3899620 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.82 | 75.0 | 6.56e-01 | 100.0% | 75.0% |
| 3511034 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.82 | 72.0 | 6.80e-01 | 100.0% | 94.0% |
| 3212183 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.80 | 70.0 | 6.90e-01 | 100.0% | 91.1% |
| 3891403 | 389.3.1.18 ↗ | few secondary structure elements › EGF-like › LDL receptor-like module › LDL receptor-like module › TSP_1 | 0.80 | 67.0 | 6.86e-01 | 100.0% | 97.5% |
| 3229890 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.80 | 70.0 | 6.88e-01 | 100.0% | 91.1% |
| 3061503 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.79 | 70.0 | 6.67e-01 | 100.0% | 85.7% |
| 3904376 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.79 | 70.0 | 6.41e-01 | 100.0% | 92.7% |
| 3751923 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.78 | 69.0 | 6.51e-01 | 100.0% | 88.0% |
| 3992374 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.78 | 69.0 | 4.94e-01 | 100.0% | 36.7% |
| 3544631 | 922.1.1.5 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_spondin | 0.77 | 67.0 | 6.00e-01 | 100.0% | 83.3% |
| 3416140 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.76 | 65.0 | 6.40e-01 | 100.0% | 86.7% |
| 3920119 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.76 | 67.0 | 6.33e-01 | 100.0% | 88.0% |
| 3934533 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.76 | 69.0 | 6.47e-01 | 100.0% | 90.0% |
| 3232170 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.76 | 68.0 | 6.47e-01 | 100.0% | 87.8% |
| 3940384 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.74 | 66.0 | 6.33e-01 | 100.0% | 89.6% |
| 3928276 | 922.1.1.4 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › CFP_C_TSP1 | 0.73 | 65.0 | 5.95e-01 | 100.0% | 85.5% |
| 3528231 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.73 | 67.0 | 6.41e-01 | 100.0% | 89.6% |
| 3931528 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.73 | 67.0 | 6.05e-01 | 100.0% | 87.3% |
| 3881971 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.73 | 63.0 | 6.09e-01 | 100.0% | 85.4% |
| 3623098 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.73 | 65.0 | 5.92e-01 | 100.0% | 78.2% |
| 3573308 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.72 | 64.0 | 5.82e-01 | 100.0% | 81.8% |
| 4673372 | 922.1.1.10 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › PMSI1 | 0.71 | 63.0 | 5.74e-01 | 100.0% | 83.6% |
| 3480796 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.70 | 63.0 | 4.12e-01 | 100.0% | 24.9% |
| 3619988 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.70 | 61.0 | 5.62e-01 | 100.0% | 85.5% |
| 2526942 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.62 | 53.0 | 3.93e-01 | 100.0% | 39.5% |
| 3513173 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.61 | 54.0 | 4.93e-01 | 97.6% | 90.9% |
| 3901224 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 3.91e-01 | 100.0% | 64.2% |
| 3930135 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.59 | 53.0 | 4.69e-01 | 100.0% | 83.3% |
| 3911099 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 47.0 | 3.84e-01 | 100.0% | 65.3% |
| 3229889 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.58 | 50.0 | 4.09e-01 | 100.0% | 57.5% |
| 3939338 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 45.0 | 3.04e-01 | 92.9% | 42.1% |
| 3575208 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.57 | 41.0 | 2.97e-01 | 95.2% | 25.6% |
| 3206031 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 43.0 | 3.41e-01 | 97.6% | 38.8% |
| 3929989 | 330.16.1.2 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › KAP | 0.54 | 42.0 | 3.48e-01 | 97.6% | 45.9% |
| 3994368 | 5.1.8.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › APEH_N | 0.54 | 41.0 | 2.64e-01 | 95.2% | 16.0% |
| 3995982 | 3209.1.1.1 ↗ | a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e | 0.54 | 42.0 | 3.44e-01 | 95.2% | 44.4% |
| 3429464 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.54 | 39.0 | 2.93e-01 | 100.0% | 25.9% |
| 3384215 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 45.0 | 3.93e-01 | 100.0% | 62.9% |
| 3288114 | 295.1.1.14 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF5984 | 0.53 | 42.0 | 2.74e-01 | 100.0% | 18.0% |
| 3932156 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.53 | 42.0 | 3.73e-01 | 95.2% | 61.5% |
| 4226251 | 375.1.1.252 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF27302 | 0.52 | 42.0 | 3.83e-01 | 100.0% | 65.0% |
| 4408649 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.52 | 40.0 | 2.69e-01 | 100.0% | 44.4% |
| 5057921 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.51 | 37.0 | 2.50e-01 | 100.0% | 16.1% |
| 3960795 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.51 | 43.0 | 4.27e-01 | 100.0% | 95.6% |
| 3542483 | 243.3.1.36 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Herpes_UL52 | 0.51 | 41.0 | 3.31e-01 | 100.0% | 44.2% |
| 3450141 | 283.2.1.8 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 | 0.50 | 39.0 | 3.20e-01 | 100.0% | 42.0% |
| 3929202 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.50 | 40.0 | 3.11e-01 | 100.0% | 38.1% |