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IMGVR_UViG_3300033463_000002-3300033463-Ga0310690_10000036220

Arc-Vir

IMGVR_UViG_3300033463_000002-3300033463-Ga0310690_10000036220

Identity

Kingdom:
archaea

Quality

68.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-88
PDB
Domain cluster: rep: SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00355__D13-66
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1exkA00 2.10.230.10 Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain 0.64 38.0 3.75e-01 75.7% 55.7%
5b3hC01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.64 34.0 4.04e-01 100.0% 79.2%
1ckmA03 4.10.87.10 Few Secondary Structures › Irregular › mRNA Capping Enzyme; Chain › mRNA Capping Enzyme; domain 3 0.55 20.0 2.36e-01 97.3% 38.9%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4060106 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.82 44.0 5.85e-01 73.0% 100.0%
3547367 386.1.1.57 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › TRAFD1-XIAF1_ZnF 0.78 41.0 4.87e-01 100.0% 76.0%
3611413 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.76 43.0 4.49e-01 74.3% 60.0%
4250770 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.76 45.0 4.66e-01 75.7% 62.9%
3592669 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.75 47.0 4.82e-01 74.3% 67.1%
3303606 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.73 39.0 4.58e-01 100.0% 76.0%
3339038 386.1.1.57 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › TRAFD1-XIAF1_ZnF 0.73 39.0 4.57e-01 100.0% 76.0%
3706455 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.73 45.0 3.95e-01 75.7% 42.7%
3702888 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.72 46.0 4.63e-01 74.3% 64.0%
3352509 361.1.1.14 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › PF30758 0.72 43.0 4.34e-01 71.6% 60.0%
3314149 361.1.1.15 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › PF28694 0.71 40.0 5.03e-01 95.9% 91.1%
4945234 361.1.1.20 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_C 0.71 45.0 4.75e-01 75.7% 72.3%
3662770 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.70 42.0 5.01e-01 70.3% 90.0%
4592703 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.69 44.0 5.10e-01 74.3% 89.1%
4024146 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.69 44.0 5.20e-01 71.6% 98.0%
3207541 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.68 45.0 4.63e-01 75.7% 71.4%
3705617 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.67 45.0 4.53e-01 75.7% 69.3%
4220475 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.66 42.0 4.24e-01 74.3% 64.0%
4976959 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.66 42.0 4.22e-01 74.3% 64.0%
3170179 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.66 45.0 4.36e-01 81.1% 62.4%
3816662 361.1.1.18 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › zf-AtTam37 0.65 40.0 4.66e-01 97.3% 85.5%
5052173 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.64 48.0 4.81e-01 83.8% 80.0%
3318682 361.1.1.4 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DUF5351 0.64 45.0 4.73e-01 73.0% 98.5%
4000324 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.64 41.0 4.15e-01 71.6% 65.3%
4345258 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 46.0 2.98e-01 78.4% 18.4%
3815072 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.62 41.0 4.69e-01 94.6% 90.9%
3253984 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.60 47.0 4.85e-01 94.6% 87.1%
4653582 361.1.1.14 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › PF30758 0.60 43.0 4.35e-01 77.0% 74.7%
3258233 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 33.0 3.71e-01 100.0% 70.9%
3488561 386.1.1.209 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › WAC_Acf1_DNA_bd 0.57 32.0 3.33e-01 98.6% 58.5%
3374729 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.56 43.0 4.40e-01 86.5% 82.4%
3432463 361.1.1.5 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › GRXCR1_C 0.54 39.0 4.22e-01 97.3% 95.0%
4017204 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.54 35.0 3.25e-01 71.6% 50.0%
5032213 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.52 40.0 2.93e-01 86.5% 65.7%
3436686 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.52 42.0 3.35e-01 87.8% 55.9%
4351918 67.1.1.4 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C 0.50 43.0 3.19e-01 90.5% 44.7%