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IMGVR_UViG_3300033463_000002-3300033463-Ga0310690_10000036230
Arc-VirIMGVR_UViG_3300033463_000002-3300033463-Ga0310690_10000036230
Identity
- Kingdom:
- archaea
Quality
93.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-123
Domain cluster:
rep: IMGVR_UViG_3300025131_006063-3300025131-Ga0209128_10025523__D43-131
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02657.21 best | SufE | 68.6 | 6.10e-19 | 94.2% | 91.0% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mzgB00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.89 | 85.0 | 7.98e-01 | 100.0% | 84.6% |
| 1wloA00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.85 | 79.0 | 7.56e-01 | 100.0% | 87.5% |
| 1ni7A00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.80 | 74.0 | 6.88e-01 | 99.2% | 80.5% |
| 1su0B00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.76 | 68.0 | 6.53e-01 | 96.7% | 99.3% |
| 6a6fA00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.75 | 67.0 | 6.42e-01 | 95.9% | 98.5% |
| 1q48A00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.70 | 55.0 | 5.37e-01 | 84.3% | 77.6% |
| 2oqhA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 46.0 | 4.74e-01 | 86.8% | 80.7% |
| 3go2A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 46.0 | 4.75e-01 | 86.8% | 84.2% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.59 | 36.0 | 4.41e-01 | 95.0% | 94.9% |
| 1yeyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 48.0 | 4.82e-01 | 88.4% | 94.4% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.59 | 46.0 | 4.75e-01 | 86.8% | 90.1% |
| 2gshA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 46.0 | 4.24e-01 | 86.8% | 86.4% |
| 2nqlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 46.0 | 4.19e-01 | 86.8% | 78.0% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 35.0 | 4.33e-01 | 99.2% | 100.0% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 46.0 | 4.59e-01 | 86.8% | 83.2% |
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 35.0 | 4.20e-01 | 81.8% | 92.5% |
| 3vfcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 45.0 | 4.25e-01 | 86.8% | 73.2% |
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 43.0 | 4.28e-01 | 88.4% | 80.8% |
| 3jvaA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 43.0 | 4.49e-01 | 86.8% | 94.7% |
| 3tavA00 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.53 | 42.0 | 3.33e-01 | 86.8% | 61.4% |
| 5mj6A04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.52 | 41.0 | 3.01e-01 | 84.3% | 88.2% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.52 | 40.0 | 3.57e-01 | 82.6% | 73.4% |
| 4jhmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 42.0 | 4.30e-01 | 88.4% | 93.2% |
| 3ijlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 42.0 | 4.40e-01 | 87.6% | 98.1% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 39.0 | 3.49e-01 | 81.0% | 72.5% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.51 | 40.0 | 3.21e-01 | 85.1% | 84.1% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028267 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.90 | 86.0 | 7.92e-01 | 99.2% | 83.1% |
| 3353411 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.90 | 87.0 | 8.05e-01 | 100.0% | 83.4% |
| 4388653 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.90 | 84.0 | 7.83e-01 | 97.5% | 83.4% |
| 3365486 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.89 | 83.0 | 7.74e-01 | 96.7% | 82.1% |
| 6732 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.89 | 85.0 | 7.93e-01 | 100.0% | 84.0% |
| 3967835 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.88 | 79.0 | 7.75e-01 | 95.0% | 87.7% |
| 3956213 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.87 | 79.0 | 7.58e-01 | 95.9% | 87.4% |
| 157752 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.85 | 79.0 | 7.56e-01 | 100.0% | 87.5% |
| 3164672 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.84 | 75.0 | 7.48e-01 | 98.3% | 92.0% |
| 4286956 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.78 | 73.0 | 7.00e-01 | 100.0% | 99.3% |
| 3959049 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.77 | 70.0 | 6.49e-01 | 98.3% | 95.3% |
| 3952800 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.77 | 71.0 | 6.48e-01 | 100.0% | 93.5% |
| 3589518 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.77 | 71.0 | 6.57e-01 | 100.0% | 93.3% |
| 4600608 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.76 | 70.0 | 6.73e-01 | 98.3% | 100.0% |
| 4927955 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.76 | 69.0 | 6.66e-01 | 97.5% | 91.1% |
| 4941861 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.74 | 65.0 | 6.45e-01 | 94.2% | 92.8% |
| 5039190 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.73 | 64.0 | 6.37e-01 | 94.2% | 93.6% |
| 5034214 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.73 | 65.0 | 6.33e-01 | 99.2% | 89.2% |
| 1949157 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.72 | 66.0 | 6.23e-01 | 100.0% | 98.6% |
| 4930492 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.72 | 66.0 | 6.10e-01 | 100.0% | 84.7% |
| 4947407 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.71 | 64.0 | 6.42e-01 | 100.0% | 99.2% |
| 3593312 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.70 | 64.0 | 6.28e-01 | 100.0% | 98.5% |
| 4987079 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.69 | 61.0 | 6.18e-01 | 99.2% | 97.5% |
| 5002687 | 244.3.1.8 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › DUF6951 | 0.69 | 48.0 | 5.21e-01 | 81.0% | 86.0% |
| 4939734 | 244.3.1.8 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › DUF6951 | 0.63 | 47.0 | 5.05e-01 | 81.0% | 90.5% |
| 162823 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.60 | 47.0 | 4.81e-01 | 88.4% | 86.3% |
| 3885988 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.57 | 39.0 | 3.38e-01 | 70.2% | 88.1% |
| 3404842 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.55 | 49.0 | 3.73e-01 | 100.0% | 84.7% |
| 4962244 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.54 | 43.0 | 4.41e-01 | 86.8% | 90.8% |
| 4975725 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.52 | 39.0 | 3.18e-01 | 81.0% | 42.2% |
| 3723461 | 4099.1.1.9 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med27 | 0.51 | 35.0 | 3.38e-01 | 71.1% | 71.7% |
| 3600529 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.50 | 36.0 | 3.88e-01 | 75.2% | 95.2% |