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IMGVR_UViG_3300033463_000002-3300033463-Ga0310690_10000036257

Arc-Vir

IMGVR_UViG_3300033463_000002-3300033463-Ga0310690_10000036257

Quality

86.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-44_116-191
PDB
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6kv9A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 63.0 5.33e-01 100.0% 94.9%
1k68A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 62.0 5.94e-01 100.0% 96.4%
2fwmX00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.12e-01 100.0% 89.6%
3mbhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.67 60.0 4.57e-01 100.0% 78.2%
3hzhA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 60.0 5.77e-01 100.0% 88.1%
1mb3A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 59.0 6.02e-01 100.0% 99.1%
3lhxA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.66 59.0 4.44e-01 99.2% 90.0%
1k66A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 59.0 5.55e-01 100.0% 91.9%
4rk5A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 60.0 5.81e-01 100.0% 89.5%
3lufB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 60.0 5.93e-01 100.0% 97.6%
4d6yA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 59.0 5.90e-01 100.0% 97.5%
3cnbA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 59.0 5.89e-01 100.0% 100.0%
2wb4B01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 59.0 4.47e-01 100.0% 42.9%
3gl9A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 58.0 5.82e-01 100.0% 98.3%
2c4kA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 58.0 5.26e-01 100.0% 96.4%
1w25A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 58.0 5.53e-01 100.0% 83.7%
3m6mD00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 57.0 5.79e-01 100.0% 99.2%
3lteD00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 57.0 5.72e-01 100.0% 95.1%
4wjmA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.64 57.0 4.27e-01 100.0% 84.6%
3h75A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 58.0 4.97e-01 100.0% 66.7%
3igfA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 57.0 4.49e-01 100.0% 99.2%
3cfyA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 58.0 5.67e-01 100.0% 92.3%
6ekgY00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 56.0 5.68e-01 100.0% 97.5%
3gt7A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 58.0 5.63e-01 100.0% 91.7%
6oapA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 57.0 5.66e-01 100.0% 95.3%
3ktoA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 56.0 5.63e-01 100.0% 96.7%
3nhmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 55.0 5.63e-01 100.0% 100.0%
6zxbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 57.0 5.55e-01 100.0% 93.1%
2jb9B00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 56.0 5.66e-01 100.0% 96.7%
3ly1A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.63 56.0 4.60e-01 100.0% 64.9%
4fx5A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.63 56.0 4.88e-01 100.0% 97.3%
3b1dA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 56.0 4.58e-01 100.0% 66.7%
1fg7A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 56.0 4.71e-01 100.0% 67.3%
3breB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 56.0 5.27e-01 100.0% 83.2%
4r5zA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 56.0 4.54e-01 100.0% 62.1%
3c3mA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 50.0 5.03e-01 88.3% 86.2%
6khnA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 55.0 4.28e-01 100.0% 53.6%
3g68A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.61 55.0 5.16e-01 100.0% 82.1%
2x5fA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.61 54.0 4.03e-01 100.0% 49.8%
2amlA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.61 55.0 5.14e-01 100.0% 82.3%
6fsgA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.61 54.0 5.07e-01 100.0% 99.3%
1sfsA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 51.0 4.32e-01 94.2% 97.2%
3fj1A01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 54.0 4.65e-01 100.0% 65.8%
2a3nA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 54.0 4.91e-01 100.0% 75.3%
3cg0A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 42.0 4.17e-01 85.0% 68.3%
3t34A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 3.95e-01 100.0% 75.8%
1t0bA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.60 53.0 4.31e-01 100.0% 90.4%
8bixC01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.60 53.0 4.30e-01 100.0% 55.2%
3lncA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 47.0 4.68e-01 100.0% 79.7%
7yiyA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.60 53.0 4.26e-01 100.0% 61.1%
3g68B01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.59 53.0 4.47e-01 100.0% 62.6%
1vypX00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 50.0 3.55e-01 90.8% 82.6%
4j07A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.59 52.0 4.89e-01 100.0% 86.8%
1gtxA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.59 52.0 3.99e-01 100.0% 55.6%
4s1wB02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.59 52.0 4.95e-01 100.0% 82.9%
4ohxA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 47.0 3.85e-01 86.7% 75.9%
2bdqA00 3.20.20.380 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain 0.58 47.0 3.97e-01 88.3% 96.2%
3mtqB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.58 45.0 4.37e-01 100.0% 73.7%
4ml9A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 51.0 3.97e-01 100.0% 78.6%
3n5mA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 50.0 3.94e-01 100.0% 60.6%
2cjgA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 51.0 3.91e-01 100.0% 57.7%
3tauA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 49.0 4.80e-01 100.0% 86.5%
1qo2A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 47.0 3.78e-01 91.7% 92.5%
4ymiB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 45.0 3.89e-01 88.3% 80.3%
5cr9A02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 48.0 4.33e-01 98.3% 70.6%
1ej0A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 4.23e-01 99.2% 85.0%
6jp6D01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 48.0 3.94e-01 99.2% 71.9%
2plwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 48.0 4.21e-01 100.0% 85.7%
2ekcB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 48.0 3.77e-01 100.0% 72.0%
3h8lA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 45.0 4.18e-01 93.3% 95.4%
3ssmC02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 45.0 3.82e-01 95.8% 75.8%
3douA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 46.0 4.12e-01 99.2% 84.0%
1kamA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 42.0 3.72e-01 86.7% 79.4%
1jeoA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.52 46.0 4.05e-01 97.5% 67.8%
1a5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 46.0 3.67e-01 100.0% 68.6%
5v1qB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 45.0 3.48e-01 100.0% 73.8%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3164582 4353.1.1.1 a/b three-layered sandwiches › C-terminal domain in CAC2185-like proteins › C-terminal domain in CAC2185-like proteins › C-terminal domain in CAC2185-like proteins › DUF1919 0.79 74.0 6.22e-01 100.0% 90.5%
3590344 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.69 62.0 5.99e-01 100.0% 98.5%
3981943 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.68 62.0 5.72e-01 100.0% 80.0%
5012331 7518.1.1.7 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_T 0.68 44.0 4.79e-01 75.8% 79.0%
5047184 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.67 60.0 6.07e-01 100.0% 98.3%
4163006 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.67 56.0 5.77e-01 100.0% 93.9%
3968444 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.67 61.0 5.89e-01 100.0% 91.9%
3278884 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.67 60.0 5.49e-01 100.0% 79.4%
5040858 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.66 60.0 5.98e-01 100.0% 98.4%
4946584 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.66 60.0 5.91e-01 100.0% 93.1%
4247760 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.66 60.0 5.76e-01 100.0% 87.9%
4980847 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.66 59.0 5.81e-01 100.0% 92.8%
4023348 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.66 60.0 5.45e-01 100.0% 76.2%
4606779 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.66 59.0 5.53e-01 100.0% 79.3%
385830 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.66 60.0 5.75e-01 100.0% 89.8%
5080107 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.66 60.0 5.84e-01 100.0% 95.4%
4043277 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 58.0 5.30e-01 100.0% 78.8%
4443047 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 58.0 5.71e-01 100.0% 91.5%
3973233 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 59.0 5.79e-01 100.0% 96.9%
3979156 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 58.0 5.41e-01 100.0% 78.7%
3337017 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 55.0 5.39e-01 100.0% 84.6%
5018336 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 58.0 5.59e-01 100.0% 87.4%
4988248 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 58.0 5.74e-01 100.0% 93.0%
4393682 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 59.0 5.54e-01 100.0% 84.7%
3278239 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 58.0 5.57e-01 100.0% 87.9%
4944740 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.65 58.0 5.57e-01 100.0% 88.6%
4939581 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 58.0 5.69e-01 100.0% 95.4%
None 0.64 58.0 5.41e-01 100.0% 79.9%
3838332 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 58.0 5.55e-01 100.0% 85.7%
3986135 2007.1.3.43 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF30453 0.64 52.0 5.28e-01 99.2% 91.3%
None 0.64 58.0 5.16e-01 100.0% 70.0%
3730395 2002.1.1.176 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase 0.64 49.0 3.79e-01 80.0% 74.2%
5004519 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.64 59.0 5.70e-01 100.0% 89.6%
5018153 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 57.0 5.25e-01 100.0% 76.1%
5083352 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 57.0 5.57e-01 100.0% 90.8%
5052869 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 58.0 5.78e-01 100.0% 97.6%
4130633 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 58.0 5.05e-01 100.0% 66.1%
3973160 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.64 58.0 5.61e-01 100.0% 90.4%
3970730 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.64 57.0 5.56e-01 100.0% 90.8%
5049630 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 58.0 5.43e-01 100.0% 85.5%
3190707 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.64 53.0 5.59e-01 100.0% 100.0%
5033898 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 57.0 5.68e-01 100.0% 99.2%
4968265 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.64 57.0 4.68e-01 100.0% 56.9%
3973896 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 56.0 5.53e-01 100.0% 90.8%
5073698 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.63 54.0 4.07e-01 95.0% 98.4%
4985423 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 56.0 5.50e-01 100.0% 90.8%
3962163 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 57.0 5.47e-01 100.0% 86.4%
139954 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 55.0 5.63e-01 100.0% 100.0%
3972637 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 57.0 5.58e-01 100.0% 94.6%
4975383 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.63 56.0 4.95e-01 100.0% 70.6%
1918778 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 56.0 5.27e-01 100.0% 81.4%
4942416 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.63 55.0 4.36e-01 95.8% 75.1%
4183670 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.63 57.0 5.48e-01 100.0% 91.9%
4947989 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.63 57.0 5.58e-01 100.0% 99.2%
4983558 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.63 57.0 5.36e-01 100.0% 86.9%
4122931 7577.1.1.1 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.62 56.0 4.39e-01 100.0% 52.7%
5053724 2007.2.1.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins 0.62 55.0 5.16e-01 100.0% 98.7%
4269582 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.62 55.0 5.40e-01 100.0% 90.8%
4238346 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.62 56.0 5.16e-01 100.0% 77.4%
4309436 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.62 55.0 4.65e-01 100.0% 62.7%
1710397 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.62 56.0 5.04e-01 100.0% 73.0%
3966620 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.62 56.0 4.09e-01 100.0% 38.5%
3286178 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.62 55.0 5.22e-01 99.2% 85.5%
4254011 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.62 55.0 4.86e-01 100.0% 70.0%
5068101 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.62 52.0 3.80e-01 91.7% 87.6%
4080194 7577.1.1.1 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.62 55.0 4.40e-01 100.0% 56.4%
4342300 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.62 55.0 3.95e-01 100.0% 35.3%
4972065 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.62 55.0 4.89e-01 100.0% 70.3%
5068155 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.61 53.0 3.98e-01 95.0% 64.7%
4954356 2007.1.8.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 0.60 54.0 5.42e-01 100.0% 98.4%
4940981 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.60 53.0 4.01e-01 100.0% 75.3%
5013517 7574.1.1.1 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.59 54.0 4.42e-01 100.0% 75.3%
5044732 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.58 52.0 4.46e-01 100.0% 67.2%
4990247 2007.1.1.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI 0.58 51.0 4.52e-01 99.2% 99.4%
4972423 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.57 47.0 4.16e-01 89.2% 92.6%
5056318 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.57 44.0 4.70e-01 98.3% 95.2%
4155711 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.56 45.0 3.83e-01 86.7% 75.5%
4160184 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.56 45.0 3.88e-01 86.7% 78.9%
4584061 2003.1.5.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.55 48.0 4.34e-01 99.2% 90.6%
4947095 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.54 47.0 4.18e-01 100.0% 77.8%
None 0.50 44.0 3.45e-01 98.3% 92.6%
D2 medium residues 45-115
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qcvA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.64 47.0 3.15e-01 95.8% 20.1%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 41.0 4.23e-01 97.2% 72.7%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.60 35.0 3.94e-01 94.4% 78.4%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.60 44.0 4.12e-01 93.0% 62.0%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.58 33.0 3.25e-01 73.2% 49.4%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.57 33.0 3.75e-01 94.4% 78.4%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.56 39.0 3.93e-01 97.2% 73.2%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.56 46.0 3.97e-01 94.4% 83.1%
2dk1A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.55 29.0 3.33e-01 91.5% 68.0%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 36.0 3.62e-01 87.3% 66.2%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.55 28.0 3.26e-01 83.1% 68.8%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.54 31.0 3.04e-01 76.1% 50.6%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 34.0 3.44e-01 91.5% 63.0%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 29.0 3.24e-01 84.5% 70.2%
3hrpA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 41.0 2.72e-01 85.9% 21.4%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 47.0 3.49e-01 100.0% 100.0%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 38.0 2.59e-01 81.7% 51.0%
4oyvA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 37.0 3.04e-01 87.3% 38.4%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 46.0 2.95e-01 100.0% 84.0%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.52 36.0 2.60e-01 71.8% 61.6%
4zovB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 2.66e-01 88.7% 18.2%
1ye8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 3.31e-01 94.4% 53.8%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 46.0 3.20e-01 100.0% 87.8%
1hyuA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 45.0 3.34e-01 100.0% 98.4%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.50 35.0 3.94e-01 91.5% 100.0%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3990001 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.65 37.0 4.13e-01 80.3% 73.6%
3265019 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 43.0 3.79e-01 85.9% 46.6%
4481543 220.1.1.150 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 0.63 39.0 3.80e-01 80.3% 55.0%
4032637 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.62 35.0 3.91e-01 78.9% 70.9%
3773509 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 42.0 4.49e-01 88.7% 83.3%
3734712 604.3.1.11 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.60 50.0 3.44e-01 98.6% 76.3%
3639073 4121.1.1.6 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › DUF155 0.59 50.0 3.43e-01 100.0% 75.2%
3331028 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 42.0 2.61e-01 78.9% 20.5%
3723770 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.57 49.0 4.69e-01 98.6% 98.8%
4936590 2498.1.1.17 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like 0.55 43.0 3.39e-01 87.3% 41.3%
5062937 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.55 44.0 3.85e-01 90.1% 83.6%
4943272 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 41.0 4.40e-01 91.5% 96.7%
5035446 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.54 39.0 4.34e-01 91.5% 98.2%
3660003 5.1.10.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › ANAPC4_WD40 0.53 42.0 4.09e-01 87.3% 76.2%
4072958 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.53 40.0 4.21e-01 93.0% 89.2%
3291448 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 46.0 4.27e-01 97.2% 94.4%
4176722 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.53 42.0 3.79e-01 88.7% 89.0%
4933970 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.52 39.0 4.24e-01 93.0% 96.7%
4833642 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.52 28.0 3.22e-01 83.1% 75.6%
3662052 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.52 36.0 3.44e-01 91.5% 61.2%
4178829 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.52 39.0 3.31e-01 98.6% 47.2%
4861381 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.52 39.0 3.80e-01 81.7% 73.8%
4625528 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.52 44.0 2.86e-01 98.6% 88.9%
2646217 5.1.2.34 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › PQQ_2 0.52 39.0 4.10e-01 81.7% 92.2%
3277752 2003.1.3.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_9 0.52 45.0 2.65e-01 98.6% 20.7%
4623924 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.51 36.0 4.03e-01 91.5% 96.4%
3659103 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.51 35.0 4.00e-01 90.1% 100.0%
5001380 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 43.0 4.21e-01 94.4% 93.8%
3543454 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.51 42.0 3.99e-01 95.8% 81.1%
4928594 221.1.2.20 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4e 0.51 38.0 2.92e-01 80.3% 54.5%
4966737 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.51 36.0 3.86e-01 93.0% 88.3%
4288670 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.50 44.0 2.88e-01 100.0% 73.2%