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IMGVR_UViG_3300033490_000046-3300033490-Ga0326760_10041796
Arc-VirIMGVR_UViG_3300033490_000046-3300033490-Ga0326760_10041796
Identity
- Kingdom:
- archaea
Quality
92.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-109
Domain cluster:
rep: IMGVR_UViG_3300017593_001614-3300017593-Ga0187538_10406130__D2-82
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pnrA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 47.0 | 3.43e-01 | 74.7% | 36.3% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.62 | 34.0 | 3.13e-01 | 86.8% | 40.2% |
| 1vwxB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 47.0 | 3.87e-01 | 92.3% | 80.0% |
| 1jb7A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 51.0 | 4.22e-01 | 100.0% | 75.1% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 34.0 | 3.09e-01 | 89.0% | 41.1% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 44.0 | 3.19e-01 | 92.3% | 76.2% |
| 3n4fA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 46.0 | 4.17e-01 | 98.9% | 71.7% |
| 3i3lA02 | 3.30.390.160 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.52 | 44.0 | 3.98e-01 | 95.6% | 68.0% |
| 1nf3C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 40.0 | 3.71e-01 | 85.7% | 81.3% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 2.68e-01 | 87.9% | 34.5% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 42.0 | 3.92e-01 | 92.3% | 96.6% |
| 1ocsA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 41.0 | 3.69e-01 | 90.1% | 96.2% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 41.0 | 3.70e-01 | 91.2% | 94.6% |
| 2i4kA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 42.0 | 3.83e-01 | 95.6% | 94.5% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4456546 | 1.1.7.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 | 0.63 | 54.0 | 3.57e-01 | 93.4% | 87.2% |
| 3412138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 54.0 | 4.65e-01 | 100.0% | 66.7% |
| 3784382 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 53.0 | 4.44e-01 | 98.9% | 99.4% |
| 3705696 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.59 | 53.0 | 3.97e-01 | 100.0% | 80.0% |
| 3958443 | 2484.1.1.108 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_assoc | 0.58 | 41.0 | 3.23e-01 | 73.6% | 53.8% |
| 3551896 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.58 | 39.0 | 4.33e-01 | 70.3% | 94.3% |
| 3939870 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 43.0 | 3.88e-01 | 80.2% | 72.3% |
| 3958652 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 41.0 | 3.27e-01 | 74.7% | 56.8% |
| 3995204 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.57 | 36.0 | 4.07e-01 | 71.4% | 90.8% |
| 4043017 | 2.1.1.173 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RADX | 0.56 | 49.0 | 4.15e-01 | 100.0% | 60.0% |
| 3344404 | 220.1.1.182 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RDR6_2nd | 0.56 | 40.0 | 3.31e-01 | 76.9% | 66.3% |
| 3968808 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 49.0 | 4.37e-01 | 98.9% | 84.6% |
| 3628462 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.55 | 34.0 | 3.96e-01 | 91.2% | 91.7% |
| 3585474 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 41.0 | 3.97e-01 | 81.3% | 69.5% |
| 3251381 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.55 | 37.0 | 4.12e-01 | 95.6% | 96.9% |
| 4003463 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.54 | 38.0 | 3.46e-01 | 72.5% | 80.0% |
| 3699374 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 39.0 | 3.51e-01 | 78.0% | 60.7% |
| 3965166 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 46.0 | 4.70e-01 | 97.8% | 97.8% |
| 4972327 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.54 | 37.0 | 3.68e-01 | 85.7% | 67.4% |
| 3493129 | 220.1.1.248 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_32 | 0.54 | 38.0 | 3.86e-01 | 91.2% | 74.4% |
| 3698360 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 43.0 | 3.56e-01 | 90.1% | 76.5% |
| 2494924 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.53 | 35.0 | 3.73e-01 | 95.6% | 79.5% |
| 3261047 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.53 | 43.0 | 3.23e-01 | 94.5% | 91.2% |
| 3396462 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.53 | 35.0 | 3.89e-01 | 70.3% | 95.4% |
| 3741279 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 42.0 | 3.76e-01 | 91.2% | 93.6% |
| 4965879 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.52 | 40.0 | 3.25e-01 | 84.6% | 93.5% |
| 3627921 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 37.0 | 3.18e-01 | 78.0% | 59.4% |
| 5051685 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.51 | 38.0 | 3.06e-01 | 100.0% | 38.4% |
| 6289 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 41.0 | 3.69e-01 | 90.1% | 96.2% |
| 3759486 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.51 | 33.0 | 3.46e-01 | 82.4% | 73.8% |
| 3453043 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.50 | 37.0 | 2.64e-01 | 80.2% | 70.5% |
| 3968270 | 3103.1.1.2 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_13 | 0.50 | 40.0 | 3.76e-01 | 85.7% | 71.8% |