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IMGVR_UViG_3300033571_022517-3300033571-Ga0364548_120153281
Arc-VirIMGVR_UViG_3300033571_022517-3300033571-Ga0364548_120153281
Identity
- Kingdom:
- archaea
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-62_74-84
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2itbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 47.0 | 3.48e-01 | 83.6% | 66.2% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 43.0 | 4.16e-01 | 90.4% | 69.0% |
| 5ab0C04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.51 | 41.0 | 2.72e-01 | 89.0% | 58.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4401075 | 5039.1.1.1 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 | 0.71 | 52.0 | 3.50e-01 | 76.7% | 35.9% |
| 5076748 | 180.1.1.5 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2_3 | 0.58 | 47.0 | 3.43e-01 | 93.2% | 80.5% |
| 3506109 | 4163.1.2.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 | 0.53 | 46.0 | 3.94e-01 | 97.3% | 72.5% |
| 3623381 | 5069.1.3.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Mpv17_PMP22 | 0.52 | 43.0 | 3.94e-01 | 93.2% | 83.0% |
D2
medium
residues 63-73_85-142
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yl8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 44.0 | 2.79e-01 | 82.6% | 33.4% |
| 3nf4A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.51 | 42.0 | 3.54e-01 | 91.3% | 84.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4982611 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 41.0 | 3.18e-01 | 84.1% | 28.8% |
| 4192977 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 37.0 | 4.05e-01 | 71.0% | 78.2% |
| 1065821 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.55 | 47.0 | 2.94e-01 | 100.0% | 30.2% |
| 3212620 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.51 | 44.0 | 3.25e-01 | 100.0% | 46.7% |
| 3783106 | 2011.2.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › POC1 | 0.50 | 42.0 | 2.93e-01 | 98.6% | 44.8% |