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IMGVR_UViG_3300033571_022517-3300033571-Ga0364548_120153285
Arc-VirIMGVR_UViG_3300033571_022517-3300033571-Ga0364548_120153285
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-78
Domain cluster:
rep: BML_08012017_9_75m_scaffold_2_prodigal-single.1__X__X__00095__D2-77
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 46.0 | 4.72e-01 | 100.0% | 86.5% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 39.0 | 2.67e-01 | 75.3% | 27.2% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 35.0 | 3.65e-01 | 90.9% | 73.5% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 34.0 | 3.29e-01 | 70.1% | 53.8% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.54 | 34.0 | 3.77e-01 | 92.2% | 84.2% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 45.0 | 3.35e-01 | 100.0% | 37.1% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 43.0 | 3.85e-01 | 100.0% | 61.3% |
| 1ynjJ02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 37.0 | 4.02e-01 | 94.8% | 91.9% |
| 6v55A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.38e-01 | 94.8% | 52.3% |
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 42.0 | 3.82e-01 | 88.3% | 93.5% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 44.0 | 3.95e-01 | 100.0% | 76.7% |
| 3sqiA02 | 1.10.443.20 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 | 0.52 | 44.0 | 3.05e-01 | 97.4% | 69.4% |
| 4tr6A01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 43.0 | 3.45e-01 | 98.7% | 53.9% |
| 7kfuC01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.52 | 36.0 | 3.72e-01 | 92.2% | 76.0% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 44.0 | 3.51e-01 | 100.0% | 50.6% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 3.58e-01 | 87.0% | 83.3% |
| 3bs1A00 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.51 | 38.0 | 3.53e-01 | 81.8% | 64.1% |
| 2rh0A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 33.0 | 3.52e-01 | 96.1% | 79.7% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 34.0 | 3.33e-01 | 100.0% | 62.4% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.50 | 38.0 | 3.35e-01 | 83.1% | 58.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4968717 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.71 | 54.0 | 5.51e-01 | 98.7% | 84.0% |
| 4998173 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.71 | 52.0 | 5.27e-01 | 98.7% | 80.0% |
| 990993 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 39.0 | 4.63e-01 | 85.7% | 95.9% |
| 3477236 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.64 | 45.0 | 2.58e-01 | 75.3% | 6.9% |
| 3028388 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.62 | 47.0 | 4.89e-01 | 97.4% | 88.9% |
| 185084 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.60 | 38.0 | 4.18e-01 | 88.3% | 83.1% |
| 3918968 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.59 | 43.0 | 2.88e-01 | 79.2% | 18.8% |
| 3987903 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.57 | 37.0 | 3.97e-01 | 87.0% | 78.5% |
| 5066808 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.56 | 43.0 | 3.79e-01 | 87.0% | 69.9% |
| 3808306 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.55 | 49.0 | 3.23e-01 | 100.0% | 81.4% |
| 3176830 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 42.0 | 3.81e-01 | 85.7% | 86.4% |
| 4980359 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.54 | 46.0 | 4.07e-01 | 100.0% | 75.8% |
| 3502859 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 37.0 | 2.54e-01 | 72.7% | 23.6% |
| 3399971 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 44.0 | 2.91e-01 | 100.0% | 87.3% |
| 4236664 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.52 | 42.0 | 3.37e-01 | 90.9% | 45.5% |
| 3477605 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 43.0 | 3.72e-01 | 93.5% | 97.7% |
| 3175415 | 211.1.1.55 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF29700 | 0.52 | 34.0 | 3.68e-01 | 92.2% | 86.7% |
| 5060420 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.51 | 30.0 | 3.68e-01 | 88.3% | 100.0% |
| 3399079 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.74e-01 | 90.9% | 98.2% |
| 3840270 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 40.0 | 3.48e-01 | 85.7% | 78.3% |
| 3244890 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 39.0 | 3.44e-01 | 83.1% | 80.0% |
| 5075225 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 40.0 | 3.56e-01 | 88.3% | 81.0% |