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IMGVR_UViG_3300033571_022517-3300033571-Ga0364548_120153287
Arc-VirIMGVR_UViG_3300033571_022517-3300033571-Ga0364548_120153287
Identity
- Kingdom:
- archaea
Quality
85.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-57
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.68 | 56.0 | 3.95e-01 | 90.6% | 79.4% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 52.0 | 4.24e-01 | 88.7% | 54.4% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 52.0 | 4.25e-01 | 88.7% | 59.0% |
| 1yy7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 48.0 | 3.96e-01 | 88.7% | 59.0% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 52.0 | 4.12e-01 | 94.3% | 85.5% |
| 5f1cA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.62 | 41.0 | 4.02e-01 | 100.0% | 62.7% |
| 4bvxA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 46.0 | 3.85e-01 | 88.7% | 83.8% |
| 3uarA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 49.0 | 4.00e-01 | 94.3% | 72.9% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 46.0 | 3.88e-01 | 92.5% | 94.1% |
| 3k2oB02 | 1.20.1280.270 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.57 | 39.0 | 4.15e-01 | 77.4% | 86.7% |
| 7p2yC03 | 1.20.150.20 | Mainly Alpha › Up-down Bundle › Lysin › ATP synthase alpha/beta chain, C-terminal domain | 0.57 | 43.0 | 3.22e-01 | 81.1% | 55.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3689887 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.80 | 37.0 | 3.55e-01 | 90.6% | 38.3% |
| 3569033 | 3538.1.1.8 ↗ | extended segments › MerF › MerF › MerF › PF28754 | 0.61 | 41.0 | 4.07e-01 | 92.5% | 67.3% |
| 3368921 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.58 | 48.0 | 2.71e-01 | 92.5% | 12.3% |