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IMGVR_UViG_3300033892_000026-3300033892-Ga0326767_000352_8_745
Arc-VirIMGVR_UViG_3300033892_000026-3300033892-Ga0326767_000352_8_745
Identity
- Kingdom:
- archaea
Quality
89.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-46
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yzmA00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.85 | 59.0 | 5.66e-01 | 73.2% | 67.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3226919 | 109.27.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › DUF1265 | 0.89 | 78.0 | 6.04e-01 | 97.6% | 47.1% |
| 3572852 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.73 | 66.0 | 4.61e-01 | 100.0% | 64.0% |
| 3976599 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 55.0 | 3.71e-01 | 100.0% | 24.0% |
D2
high
residues 58-209
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.71 | 59.0 | 5.25e-01 | 88.2% | 86.7% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.61 | 23.0 | 3.22e-01 | 71.1% | 66.7% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 28.0 | 3.67e-01 | 94.1% | 87.5% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 24.0 | 3.14e-01 | 75.0% | 68.3% |
| 4bwxA03 | 1.10.287.3700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 28.0 | 3.75e-01 | 83.6% | 95.0% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 26.0 | 3.38e-01 | 90.1% | 84.8% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.51 | 28.0 | 3.32e-01 | 84.9% | 78.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016957 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 62.0 | 5.91e-01 | 84.2% | 88.0% |
| 4118349 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.74 | 55.0 | 5.85e-01 | 77.6% | 97.0% |
| 5014787 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 27.0 | 3.52e-01 | 91.4% | 77.6% |
| 3229643 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 25.0 | 2.85e-01 | 84.2% | 53.3% |
| 3679705 | 109.4.1.1156 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif | 0.55 | 32.0 | 3.33e-01 | 80.3% | 60.0% |
| 3592028 | 109.4.1.218 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP | 0.53 | 37.0 | 3.48e-01 | 71.1% | 77.3% |
| 4124123 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 37.0 | 2.95e-01 | 77.6% | 39.3% |