←Back to structures
IMGVR_UViG_3300033892_000062-3300033892-Ga0326767_000267_2_430
Arc-VirIMGVR_UViG_3300033892_000062-3300033892-Ga0326767_000267_2_430
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-140
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.75 | 47.0 | 4.53e-01 | 98.1% | 56.3% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 46.0 | 4.81e-01 | 99.0% | 76.8% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.67 | 45.0 | 4.03e-01 | 100.0% | 50.4% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.62 | 43.0 | 3.96e-01 | 100.0% | 55.1% |
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.57 | 50.0 | 3.62e-01 | 100.0% | 60.4% |
| 5zyuA01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.56 | 52.0 | 4.14e-01 | 100.0% | 60.2% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.56 | 50.0 | 3.93e-01 | 100.0% | 48.5% |
| 1ym3A00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.56 | 46.0 | 3.86e-01 | 92.4% | 96.9% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.56 | 50.0 | 4.09e-01 | 100.0% | 53.6% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.55 | 51.0 | 3.96e-01 | 100.0% | 62.6% |
| 1ekjA00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.55 | 50.0 | 3.95e-01 | 99.0% | 78.1% |
| 1cttA02 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 45.0 | 4.43e-01 | 89.5% | 83.5% |
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.55 | 49.0 | 3.84e-01 | 100.0% | 48.9% |
| 8d3mI01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.53 | 48.0 | 3.86e-01 | 100.0% | 52.7% |
| 3u4qA06 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.53 | 48.0 | 3.76e-01 | 99.0% | 74.5% |
| 4hn3A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.53 | 46.0 | 3.31e-01 | 100.0% | 52.4% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 40.0 | 4.23e-01 | 100.0% | 91.6% |
| 2w3qA02 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.52 | 46.0 | 3.99e-01 | 99.0% | 95.7% |
| 4i1tA02 | 3.30.70.2640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Arenavirus RNA polymerase | 0.52 | 38.0 | 4.15e-01 | 91.4% | 98.8% |
| 3npdA00 | 3.30.300.250 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.51 | 43.0 | 4.21e-01 | 92.4% | 89.4% |
| 4akfA01 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.51 | 41.0 | 2.97e-01 | 89.5% | 74.1% |
| 4gm6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 43.0 | 3.03e-01 | 91.4% | 36.9% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.51 | 45.0 | 3.79e-01 | 100.0% | 58.2% |
| 3ktzA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.50 | 33.0 | 2.79e-01 | 93.3% | 41.1% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1167962 | 3351.2.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › ORF273 protein from Acidianus two-tailed virus › ORF273 protein from Acidianus two-tailed virus › ATV_ORF273 | 0.80 | 75.0 | 5.56e-01 | 100.0% | 43.9% |
| 4438753 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.68 | 63.0 | 4.59e-01 | 100.0% | 51.1% |
| 3484067 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.64 | 46.0 | 4.12e-01 | 98.1% | 53.8% |
| 4955488 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 48.0 | 4.79e-01 | 100.0% | 79.1% |
| 4122042 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.61 | 44.0 | 4.03e-01 | 98.1% | 58.5% |
| 3452624 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.61 | 54.0 | 4.08e-01 | 100.0% | 72.7% |
| 3170447 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.59 | 52.0 | 4.01e-01 | 100.0% | 70.6% |
| 4084414 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.58 | 53.0 | 4.77e-01 | 100.0% | 97.1% |
| 4031223 | 2008.1.1.204 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2800 | 0.57 | 52.0 | 3.93e-01 | 100.0% | 59.6% |
| 4394279 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.57 | 52.0 | 4.99e-01 | 100.0% | 92.5% |
| 4312961 | 3148.1.1.0 ↗ | a+b two layers › putative secreted protein PA3611 › putative secreted protein PA3611 › putative secreted protein PA3611 | 0.57 | 43.0 | 4.34e-01 | 100.0% | 80.6% |
| 3221910 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.56 | 51.0 | 3.82e-01 | 100.0% | 56.5% |
| 3238337 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.56 | 46.0 | 3.23e-01 | 91.4% | 79.4% |
| 4208554 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.56 | 52.0 | 5.03e-01 | 100.0% | 98.3% |
| 3459162 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.56 | 42.0 | 3.20e-01 | 100.0% | 31.1% |
| 3365771 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.56 | 49.0 | 3.84e-01 | 100.0% | 74.2% |
| 3588071 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 51.0 | 4.43e-01 | 100.0% | 67.5% |
| 3969697 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 50.0 | 4.35e-01 | 100.0% | 65.8% |
| 4670340 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 50.0 | 4.91e-01 | 100.0% | 94.7% |
| 3818045 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.55 | 49.0 | 3.73e-01 | 99.0% | 65.2% |
| 4666672 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 50.0 | 4.89e-01 | 100.0% | 96.5% |
| 4943737 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 50.0 | 4.31e-01 | 100.0% | 67.5% |
| 4060516 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 49.0 | 4.83e-01 | 100.0% | 94.8% |
| 3613938 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 39.0 | 2.79e-01 | 97.1% | 23.9% |
| 3496629 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.54 | 47.0 | 4.12e-01 | 100.0% | 74.7% |
| 4311371 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.54 | 49.0 | 4.68e-01 | 100.0% | 90.8% |
| 4486866 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.54 | 47.0 | 4.14e-01 | 100.0% | 71.5% |
| 4144066 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.54 | 38.0 | 4.06e-01 | 99.0% | 85.6% |
| 5012280 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.53 | 48.0 | 3.86e-01 | 100.0% | 53.7% |
| 4331282 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.53 | 45.0 | 3.38e-01 | 93.3% | 82.6% |
| 3329211 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.53 | 48.0 | 3.89e-01 | 100.0% | 79.5% |
| 3288745 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.53 | 47.0 | 3.75e-01 | 100.0% | 50.2% |
| 865573 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.52 | 46.0 | 4.13e-01 | 100.0% | 79.3% |
| 2420866 | 2492.1.1.19 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › STIL_N | 0.52 | 46.0 | 3.98e-01 | 100.0% | 77.7% |
| 1179312 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.52 | 45.0 | 3.67e-01 | 100.0% | 57.5% |
| 3781577 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.52 | 43.0 | 3.01e-01 | 92.4% | 58.2% |
| 4081795 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.52 | 44.0 | 3.06e-01 | 92.4% | 69.8% |
| 4098518 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.52 | 43.0 | 2.98e-01 | 92.4% | 65.5% |
| 3521006 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.51 | 46.0 | 3.71e-01 | 100.0% | 80.5% |
| 3181219 | 207.1.1.243 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF7730 | 0.51 | 47.0 | 3.72e-01 | 100.0% | 74.3% |
| 3782709 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.51 | 46.0 | 3.13e-01 | 100.0% | 67.9% |
| 4536530 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.51 | 46.0 | 3.50e-01 | 100.0% | 69.4% |
| 3454753 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.51 | 45.0 | 3.47e-01 | 98.1% | 74.5% |
| 3821558 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.50 | 42.0 | 2.99e-01 | 92.4% | 65.1% |
| 4342594 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.50 | 40.0 | 3.32e-01 | 100.0% | 48.6% |