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IMGVR_UViG_3300033990_000450-3300033990-Ga0373184_0001995_5536_5787
Arc-VirIMGVR_UViG_3300033990_000450-3300033990-Ga0373184_0001995_5536_5787
Identity
- Kingdom:
- archaea
Quality
67.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-62
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 50.0 | 5.37e-01 | 96.6% | 88.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 48.0 | 4.13e-01 | 100.0% | 48.0% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 46.0 | 4.93e-01 | 98.3% | 95.9% |
| 5nldB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 51.0 | 3.87e-01 | 86.4% | 76.8% |
| 2re3B03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 33.0 | 4.27e-01 | 88.1% | 96.7% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 48.0 | 4.32e-01 | 100.0% | 57.6% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.63 | 48.0 | 4.72e-01 | 86.4% | 97.0% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 43.0 | 4.53e-01 | 96.6% | 86.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.69e-01 | 100.0% | 81.8% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.69e-01 | 100.0% | 81.8% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.60 | 50.0 | 3.74e-01 | 100.0% | 46.5% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 44.0 | 4.45e-01 | 100.0% | 81.7% |
| 3u1xA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.56 | 48.0 | 3.32e-01 | 100.0% | 45.6% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.56 | 40.0 | 4.15e-01 | 93.2% | 85.2% |
| 6xofA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 3.20e-01 | 100.0% | 46.2% |
| 3u6uC00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.55 | 39.0 | 2.60e-01 | 78.0% | 27.1% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 43.0 | 3.90e-01 | 100.0% | 60.9% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.54 | 36.0 | 2.92e-01 | 93.2% | 35.7% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 44.0 | 3.93e-01 | 100.0% | 68.1% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.98e-01 | 94.9% | 83.3% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.53 | 37.0 | 3.94e-01 | 94.9% | 93.8% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 43.0 | 3.48e-01 | 96.6% | 46.4% |
| 4gnrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 46.0 | 3.44e-01 | 98.3% | 95.2% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.68e-01 | 100.0% | 69.6% |
| 2greA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 44.0 | 3.00e-01 | 100.0% | 91.5% |
| 2rc3C00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 38.0 | 3.09e-01 | 84.7% | 44.5% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.80e-01 | 94.9% | 95.8% |
| 4s21B02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 37.0 | 2.97e-01 | 84.7% | 38.7% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.51 | 43.0 | 3.53e-01 | 98.3% | 64.3% |
| 1cmjA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 43.0 | 2.66e-01 | 100.0% | 95.7% |
| 3ng2B00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 32.0 | 3.17e-01 | 76.3% | 56.7% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.51 | 42.0 | 3.30e-01 | 100.0% | 56.6% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.50 | 35.0 | 3.76e-01 | 79.7% | 100.0% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3213954 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.78 | 44.0 | 3.05e-01 | 78.0% | 17.4% |
| 4031509 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 60.0 | 5.98e-01 | 98.3% | 90.0% |
| 4182876 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.67 | 41.0 | 2.79e-01 | 78.0% | 17.1% |
| 4989217 | 304.39.1.6 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_2nd | 0.66 | 50.0 | 5.02e-01 | 98.3% | 80.0% |
| 4927654 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 51.0 | 5.03e-01 | 100.0% | 80.0% |
| 3429600 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.65 | 58.0 | 4.50e-01 | 100.0% | 70.0% |
| 5004476 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 4.77e-01 | 100.0% | 76.9% |
| 4953054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 49.0 | 4.65e-01 | 98.3% | 69.3% |
| 4973749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 49.0 | 4.74e-01 | 98.3% | 74.3% |
| 4662294 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 49.0 | 5.04e-01 | 100.0% | 94.5% |
| 5002601 | 4.1.1.485 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6897 | 0.64 | 49.0 | 4.98e-01 | 98.3% | 89.8% |
| 3935387 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.64 | 44.0 | 2.93e-01 | 93.2% | 17.9% |
| 4985969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 4.86e-01 | 98.3% | 86.7% |
| 5001903 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 4.67e-01 | 98.3% | 74.3% |
| 5046560 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.63 | 55.0 | 4.43e-01 | 100.0% | 80.8% |
| 4656461 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.63 | 48.0 | 4.84e-01 | 100.0% | 85.0% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.62 | 49.0 | 4.57e-01 | 100.0% | 67.5% |
| 4987025 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.62 | 51.0 | 3.24e-01 | 100.0% | 18.6% |
| 3602921 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 46.0 | 4.69e-01 | 98.3% | 87.3% |
| 4044896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 47.0 | 4.50e-01 | 100.0% | 70.7% |
| 4936291 | 4.1.1.487 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7205 | 0.62 | 47.0 | 4.66e-01 | 98.3% | 80.0% |
| 135648 | 4.1.1.142 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq_1 | 0.62 | 48.0 | 4.78e-01 | 100.0% | 84.6% |
| 4658938 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.61 | 48.0 | 4.31e-01 | 100.0% | 60.0% |
| 4123180 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.61 | 48.0 | 4.55e-01 | 100.0% | 72.0% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.61 | 46.0 | 4.56e-01 | 100.0% | 80.0% |
| 4514731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.23e-01 | 100.0% | 61.2% |
| 5080336 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.81e-01 | 100.0% | 87.5% |
| 1263519 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.60 | 48.0 | 4.74e-01 | 100.0% | 88.7% |
| 3036710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 49.0 | 4.83e-01 | 98.3% | 88.9% |
| 5028741 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.59e-01 | 98.3% | 94.5% |
| 4368811 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.59 | 42.0 | 4.33e-01 | 93.2% | 83.6% |
| 3821778 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 42.0 | 4.42e-01 | 89.8% | 98.0% |
| 2841859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 51.0 | 4.78e-01 | 100.0% | 94.6% |
| 5034351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 43.0 | 4.50e-01 | 93.2% | 89.1% |
| 4400642 | 4.1.1.257 ↗ | beta barrels › SH3 › SH3 › SH3 › Flag1_repress | 0.57 | 48.0 | 4.36e-01 | 100.0% | 87.1% |
| 5000741 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.57 | 45.0 | 4.41e-01 | 100.0% | 83.1% |
| 4554867 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 46.0 | 4.52e-01 | 100.0% | 87.7% |
| 3951704 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.56 | 50.0 | 4.74e-01 | 98.3% | 97.1% |
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.56 | 41.0 | 4.26e-01 | 98.3% | 87.3% |
| 4331473 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.56 | 41.0 | 3.81e-01 | 98.3% | 60.0% |
| 4214438 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 45.0 | 4.44e-01 | 100.0% | 87.7% |
| 5017637 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.55 | 42.0 | 4.31e-01 | 100.0% | 92.7% |
| 3969500 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 46.0 | 4.07e-01 | 100.0% | 92.6% |
| 4418620 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 48.0 | 2.64e-01 | 100.0% | 58.5% |
| 4957888 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.55 | 42.0 | 4.24e-01 | 100.0% | 86.7% |
| 3420348 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.54 | 40.0 | 4.13e-01 | 98.3% | 90.9% |
| 4351616 | 220.1.1.10 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SSrecog | 0.54 | 45.0 | 3.60e-01 | 93.2% | 83.3% |
| 2897753 | 220.1.1.10 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SSrecog | 0.54 | 43.0 | 3.96e-01 | 88.1% | 83.1% |
| 4646501 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 44.0 | 3.41e-01 | 100.0% | 81.9% |
| 3903213 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 38.0 | 2.83e-01 | 88.1% | 26.3% |
| 3964846 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.53 | 41.0 | 3.77e-01 | 100.0% | 61.2% |
| 4179803 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.53 | 44.0 | 3.02e-01 | 91.5% | 35.5% |
| 3938589 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.53 | 38.0 | 4.07e-01 | 96.6% | 92.0% |
| 3660108 | 1.1.1.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD | 0.53 | 45.0 | 3.79e-01 | 94.9% | 99.0% |
| 4252943 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.53 | 38.0 | 3.98e-01 | 98.3% | 96.0% |
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.52 | 38.0 | 3.79e-01 | 93.2% | 76.7% |
| 3175310 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 45.0 | 3.21e-01 | 100.0% | 34.9% |
| 3612587 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.52 | 39.0 | 3.96e-01 | 86.4% | 80.0% |
| 4995901 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.83e-01 | 100.0% | 87.3% |
| 3817476 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.52 | 38.0 | 4.05e-01 | 100.0% | 96.0% |
| 3270324 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.52 | 39.0 | 4.14e-01 | 91.5% | 98.0% |
| 5033600 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.87e-01 | 93.2% | 93.9% |
| 4284709 | 4.1.1.111 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_RapA | 0.52 | 37.0 | 3.79e-01 | 88.1% | 85.5% |
| 4029394 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.50 | 43.0 | 3.00e-01 | 96.6% | 34.4% |
| 1145920 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.50 | 36.0 | 3.33e-01 | 88.1% | 56.6% |
| 3484822 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.50 | 40.0 | 3.72e-01 | 98.3% | 68.8% |