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IMGVR_UViG_3300034354_000165-3300034354-Ga0364943_0000010_25955_26899

Arc-Vir

IMGVR_UViG_3300034354_000165-3300034354-Ga0364943_0000010_25955_26899

Quality

85.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 213-313
PDB
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6o38A01 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.76 64.0 6.72e-01 92.1% 98.9%
1hf2A02 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 48.0 4.76e-01 95.0% 76.4%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.59 29.0 3.10e-01 88.1% 52.3%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.59 49.0 4.67e-01 96.0% 76.2%
4mz2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 37.0 3.62e-01 95.0% 58.6%
3mxnA01 2.40.50.510 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 39.0 4.33e-01 86.1% 88.7%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.57 32.0 3.31e-01 76.2% 58.9%
7rpyA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.70e-01 98.0% 90.3%
2otrA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.55 28.0 3.01e-01 88.1% 55.6%
3kf8B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 41.0 3.92e-01 84.2% 80.8%
3f8tA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 37.0 4.10e-01 96.0% 97.5%
4b9gA00 2.60.40.3480 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 40.0 3.55e-01 85.1% 70.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2581339 520.2.1.1 beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.75 64.0 6.68e-01 96.0% 97.9%
4933908 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.61 28.0 3.07e-01 90.1% 50.6%
3382288 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.59 47.0 4.49e-01 83.2% 92.2%
4937997 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.58 42.0 4.54e-01 76.2% 96.2%
5007064 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.57 27.0 3.17e-01 74.3% 62.7%
166546 4312.1.1.10 a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.55 28.0 3.01e-01 88.1% 55.6%
3739833 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 42.0 4.14e-01 86.1% 90.9%
3237256 5.1.4.156 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 0.51 41.0 2.80e-01 92.1% 97.3%
3319527 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.51 40.0 3.32e-01 84.2% 84.6%
177953 2.1.1.68 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.50 40.0 3.55e-01 87.1% 84.1%
D2 medium residues 1-74
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.51 29.0 2.81e-01 87.8% 48.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4558826 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.50 30.0 2.97e-01 87.8% 55.0%
D3 medium residues 84-202
PDB
Domain cluster: representative