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IMGVR_UViG_3300034518_000012-3300034518-Ga0376305_16755_6993_7568
Arc-VirIMGVR_UViG_3300034518_000012-3300034518-Ga0376305_16755_6993_7568
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 80-191
Domain cluster:
rep: IMGVR_UViG_3300025133_003884-3300025133-Ga0208299_10032694__D59-164
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eyuA00 | 3.40.210.10 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › PVUII Endonuclease, subunit A | 0.79 | 61.0 | 5.46e-01 | 100.0% | 59.0% |
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.65 | 40.0 | 3.94e-01 | 100.0% | 56.5% |
| 1gefA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.63 | 38.0 | 3.77e-01 | 100.0% | 55.8% |
| 2kcqA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.62 | 35.0 | 3.17e-01 | 99.1% | 39.9% |
| 1azoA00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.62 | 54.0 | 4.43e-01 | 98.2% | 67.8% |
| 1wxxA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.60 | 34.0 | 4.22e-01 | 95.5% | 93.8% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.59 | 41.0 | 4.31e-01 | 100.0% | 81.0% |
| 5dnoA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.56 | 42.0 | 3.68e-01 | 100.0% | 53.7% |
| 3ndhA00 | 3.40.600.30 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › | 0.55 | 47.0 | 3.80e-01 | 100.0% | 49.1% |
| 1zboA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.53 | 40.0 | 4.06e-01 | 100.0% | 80.5% |
| 3ednA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 36.0 | 3.25e-01 | 98.2% | 49.4% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.52 | 40.0 | 4.04e-01 | 100.0% | 82.6% |
| 4rcjA01 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.52 | 41.0 | 3.76e-01 | 100.0% | 64.4% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 36.0 | 3.25e-01 | 99.1% | 49.7% |
| 4rcmB00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.52 | 40.0 | 3.63e-01 | 100.0% | 59.7% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 388456 | 2008.1.1.41 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Endonuc-PvuII | 0.81 | 64.0 | 5.59e-01 | 100.0% | 57.9% |
| 5069954 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.66 | 38.0 | 3.78e-01 | 100.0% | 53.4% |
| 4365754 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.63 | 46.0 | 3.73e-01 | 77.7% | 41.2% |
| 4991180 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.62 | 40.0 | 3.80e-01 | 100.0% | 54.6% |
| 4928680 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 42.0 | 3.55e-01 | 78.6% | 41.1% |
| 4028354 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.61 | 46.0 | 3.39e-01 | 77.7% | 46.4% |
| 5043638 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.61 | 40.0 | 4.34e-01 | 100.0% | 78.9% |
| 5013306 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 44.0 | 4.01e-01 | 100.0% | 58.7% |
| 3991601 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.57 | 43.0 | 3.83e-01 | 100.0% | 54.7% |
| 3600391 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.57 | 40.0 | 3.88e-01 | 100.0% | 65.6% |
| 4938551 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.57 | 41.0 | 4.41e-01 | 94.6% | 94.4% |
| 5036502 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.55 | 33.0 | 3.46e-01 | 92.0% | 62.9% |
| 5028193 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.55 | 37.0 | 3.60e-01 | 100.0% | 60.8% |
| 3741070 | 1.1.9.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › YTH | 0.55 | 41.0 | 3.54e-01 | 100.0% | 49.4% |
| 4331456 | 2008.1.1.187 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_AccI | 0.55 | 43.0 | 3.51e-01 | 100.0% | 44.8% |
| 1145719 | 2008.1.1.62 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ThaI | 0.55 | 47.0 | 3.83e-01 | 100.0% | 50.2% |
| 5066412 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.55 | 35.0 | 3.49e-01 | 100.0% | 60.0% |
| 1167962 | 3351.2.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › ORF273 protein from Acidianus two-tailed virus › ORF273 protein from Acidianus two-tailed virus › ATV_ORF273 | 0.54 | 48.0 | 3.81e-01 | 100.0% | 67.1% |
| 4958443 | 1.1.9.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF28530 | 0.53 | 40.0 | 3.42e-01 | 100.0% | 50.3% |
| 4836755 | 1.1.9.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › YTH | 0.53 | 42.0 | 3.50e-01 | 100.0% | 49.7% |
| 3924796 | 223.2.1.12 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int | 0.53 | 40.0 | 3.96e-01 | 88.4% | 77.4% |
| 4946143 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 36.0 | 3.40e-01 | 100.0% | 58.5% |
| 3725765 | 2008.1.1.147 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29557 | 0.52 | 39.0 | 3.23e-01 | 80.4% | 44.9% |
| 3501498 | 1.1.9.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › YTH | 0.51 | 39.0 | 3.47e-01 | 100.0% | 54.7% |
| 4978856 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.51 | 46.0 | 3.80e-01 | 100.0% | 56.0% |
| 4972132 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.51 | 45.0 | 3.71e-01 | 100.0% | 54.8% |