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IMGVR_UViG_3300034822_000466-3300034822-Ga0377343_74025_1_423

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300034822_000466-3300034822-Ga0377343_74025_1_423 ↗
Kingdom:: archaea

Quality

96.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-131

PDB

Domain cluster: rep: S27_BME27_1069154_prodigal-single.1__X__X__00299__D30-118

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6o38A04	2.60.120.1230	Mainly Beta › Sandwich › Jelly Rolls ›	0.63	52.0	5.27e-01	100.0%	93.3%
1a65A01	2.60.40.420	Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins	0.60	43.0	3.84e-01	75.0%	73.5%
3syjA02	2.160.20.20	Mainly Beta › 3 Solenoid › Pectate Lyase C-like ›	0.57	45.0	2.79e-01	89.1%	41.0%
1dzfA01	3.40.1340.10	Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain	0.56	40.0	3.53e-01	75.0%	59.4%
6z6fA01	3.40.800.20	Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain	0.56	45.0	3.10e-01	91.3%	44.6%
1uwvA02	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.56	49.0	3.79e-01	97.8%	68.6%
6sshA01	3.40.50.11210	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Rap/Ran-GAP	0.54	49.0	3.87e-01	98.9%	82.2%
3tvaA00	3.20.20.150	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes	0.53	44.0	3.23e-01	95.7%	50.0%
3lccA00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.52	46.0	3.57e-01	100.0%	73.1%
1srqC02	3.40.50.11210	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Rap/Ran-GAP	0.52	45.0	3.68e-01	98.9%	95.7%
3ngxA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.52	44.0	4.01e-01	93.5%	80.8%
1wlsA02	3.40.50.40	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.51	43.0	3.96e-01	100.0%	83.8%
3n2qA02	3.30.300.190	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 ›	0.51	44.0	4.10e-01	96.7%	83.6%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3942383	520.2.1.0 ↗	beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE	0.91	75.0	7.64e-01	100.0%	87.8%
3840065	208.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes	0.60	53.0	4.00e-01	98.9%	40.6%
None	—		0.59	49.0	3.51e-01	91.3%	38.5%
3255496	207.1.1.129 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_ComC	0.56	48.0	3.23e-01	95.7%	30.8%
4461157	1160.1.1.1 ↗	beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › TGFBR3_N	0.55	42.0	3.56e-01	93.5%	48.1%
3485798	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	41.0	3.60e-01	87.0%	78.0%
4968912	2002.1.1.0 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels	0.52	39.0	2.71e-01	83.7%	34.6%
3233815	207.1.1.81 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH	0.51	42.0	3.17e-01	94.6%	61.0%
1164098	3535.1.1.1 ↗	a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS	0.51	44.0	4.10e-01	96.7%	83.6%
3654037	207.1.1.95 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14	0.50	41.0	3.13e-01	91.3%	42.2%