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IMGVR_UViG_3300035034_003486-3300035034-Ga0374946_241041_13436_13540

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300035034_003486-3300035034-Ga0374946_241041_13436_13540 ↗
Kingdom:: archaea

Quality

73.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-35

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4jn3A01	3.30.559.10	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain	0.60	42.0	2.59e-01	74.3%	52.4%
7nitA04	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	42.0	3.13e-01	91.4%	57.4%
5ek8A01	2.60.40.3330	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.57	41.0	2.85e-01	77.1%	30.2%
2kgfA00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.56	44.0	3.07e-01	100.0%	62.9%
1p65A00	6.10.140.90	Special › Helix non-globular › Helix Hairpins ›	0.54	37.0	3.26e-01	71.4%	42.1%
4zpjA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.53	38.0	2.53e-01	77.1%	16.4%
2kloA00	1.10.10.1420	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain	0.52	35.0	2.51e-01	74.3%	20.3%
1uyvA01	3.90.226.10	Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1	0.51	35.0	2.24e-01	82.9%	63.0%
3tm4A01	3.30.2130.30	Alpha Beta › 2-Layer Sandwich › VC0802-like ›	0.51	36.0	2.37e-01	74.3%	21.7%
3r0aA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	36.0	2.63e-01	100.0%	24.2%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3890041	101.1.1.1 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain	0.60	41.0	2.96e-01	71.4%	24.5%
3662757	206.1.1.20 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr	0.58	48.0	3.07e-01	100.0%	61.0%
3798375	304.102.1.0 ↗	a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase	0.58	43.0	2.62e-01	100.0%	11.2%
3335794	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.56	43.0	2.62e-01	85.7%	68.1%
3520913	5054.1.1.8 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2	0.55	41.0	2.32e-01	91.4%	8.2%
3734885	4121.1.1.0 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like	0.54	47.0	2.75e-01	100.0%	65.9%
7688	808.1.1.2 ↗	a+b duplicates or obligate multimers › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › Arteri_nucleo	0.54	37.0	3.26e-01	71.4%	42.1%
3990199	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.53	43.0	2.51e-01	100.0%	41.4%
3384153	206.1.1.20 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr	0.52	37.0	2.34e-01	80.0%	22.1%
3807532	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.51	40.0	2.28e-01	97.1%	60.4%
3583670	323.1.1.3 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding	0.51	35.0	2.30e-01	100.0%	14.2%