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IMGVR_UViG_3300035050_000175-3300035050-Ga0376522_002199_4621_4962
Arc-VirIMGVR_UViG_3300035050_000175-3300035050-Ga0376522_002199_4621_4962
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-113
Domain cluster:
rep: ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00121__D6-101
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.52 | 28.0 | 2.41e-01 | 70.6% | 34.6% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 33.0 | 3.46e-01 | 75.2% | 69.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990145 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 28.0 | 2.99e-01 | 72.5% | 47.4% |
| 3972149 | 322.1.1.1 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr | 0.57 | 27.0 | 3.14e-01 | 84.4% | 60.0% |
| 3210034 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 38.0 | 3.03e-01 | 80.7% | 37.0% |