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IMGVR_UViG_3300035050_000175-3300035050-Ga0376522_002199_8986_9366

Arc-Vir

IMGVR_UViG_3300035050_000175-3300035050-Ga0376522_002199_8986_9366

Quality

73.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 71-126
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xriA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.75 57.0 4.11e-01 96.4% 30.5%
2jpcA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 6.02e-01 96.4% 91.8%
4fe7A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 59.0 4.79e-01 98.2% 48.6%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 60.0 4.10e-01 98.2% 27.7%
3rmqA02 6.10.140.1650 Special › Helix non-globular › Helix Hairpins › 0.69 50.0 5.07e-01 80.4% 76.8%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.26e-01 98.2% 71.2%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.40e-01 98.2% 79.2%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.12e-01 100.0% 72.4%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 5.66e-01 96.4% 100.0%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.67 45.0 4.99e-01 91.1% 95.1%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 5.15e-01 98.2% 86.6%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 4.97e-01 98.2% 77.3%
1p2fA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.51e-01 94.6% 73.7%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.64 55.0 4.78e-01 98.2% 66.3%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 5.18e-01 96.4% 93.1%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 5.10e-01 96.4% 89.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 4.98e-01 100.0% 77.6%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 52.0 4.30e-01 94.6% 50.5%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 5.20e-01 98.2% 87.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.63 52.0 4.13e-01 100.0% 46.6%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 5.06e-01 98.2% 91.0%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.61 47.0 4.93e-01 91.1% 96.0%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.51e-01 98.2% 81.7%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.46e-01 98.2% 80.0%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.37e-01 98.2% 81.7%
3ljlA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 51.0 3.79e-01 100.0% 40.3%
4z4qA04 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.58 40.0 3.50e-01 73.2% 52.8%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.17e-01 98.2% 73.9%
3boqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 3.58e-01 96.4% 41.5%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 39.0 3.31e-01 75.0% 46.2%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.56 40.0 3.45e-01 89.3% 45.7%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.56 39.0 3.58e-01 76.8% 69.6%
1kkxA00 1.10.150.60 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › ARID DNA-binding domain 0.55 45.0 3.89e-01 100.0% 62.7%
1o82A00 1.20.225.10 Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 0.55 43.0 4.14e-01 96.4% 80.0%
1j2zA02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.52 41.0 3.94e-01 92.9% 77.6%
3nqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.52 40.0 3.10e-01 89.3% 56.8%
2m4eA00 1.20.120.1930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family 0.52 35.0 3.16e-01 73.2% 79.1%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4933758 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 53.0 5.83e-01 78.6% 84.4%
5030502 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 51.0 5.50e-01 71.4% 88.9%
3942695 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.72 62.0 5.99e-01 100.0% 92.3%
3283074 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.72 62.0 5.43e-01 98.2% 68.2%
5058272 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.71 52.0 5.60e-01 94.6% 97.8%
3962552 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 61.0 5.60e-01 100.0% 78.7%
3968151 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 60.0 5.26e-01 98.2% 65.9%
3968604 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 60.0 5.18e-01 98.2% 64.0%
5057140 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 6.04e-01 98.2% 96.7%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 60.0 5.77e-01 100.0% 89.2%
3972360 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 55.0 5.49e-01 91.1% 88.3%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.69 55.0 5.46e-01 100.0% 83.3%
3972891 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.69 58.0 4.92e-01 100.0% 60.0%
2761 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 58.0 5.12e-01 100.0% 72.4%
3951084 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 57.0 5.37e-01 98.2% 80.0%
4008147 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 57.0 5.48e-01 96.4% 86.2%
3286659 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 56.0 5.28e-01 96.4% 87.1%
4551350 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.67 58.0 4.92e-01 100.0% 61.1%
3945377 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 58.0 5.57e-01 100.0% 90.8%
4241531 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 56.0 5.32e-01 98.2% 81.4%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 55.0 5.05e-01 98.2% 72.5%
4606780 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 56.0 5.51e-01 98.2% 95.0%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 4.97e-01 87.5% 76.7%
3975610 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 57.0 5.34e-01 100.0% 78.6%
3953111 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 55.0 5.23e-01 98.2% 85.7%
3941764 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 55.0 5.36e-01 98.2% 89.2%
4030763 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 55.0 5.29e-01 96.4% 87.7%
3974013 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 54.0 5.30e-01 92.9% 90.0%
4009970 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 55.0 5.35e-01 98.2% 87.7%
4492035 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 54.0 5.16e-01 98.2% 81.4%
142817 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 55.0 5.13e-01 98.2% 80.6%
4071326 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 56.0 5.02e-01 98.2% 71.2%
3978496 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 55.0 5.16e-01 98.2% 77.1%
3944331 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 55.0 4.99e-01 98.2% 72.5%
3946608 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 55.0 5.22e-01 100.0% 82.9%
4934340 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.66 55.0 4.66e-01 98.2% 66.0%
3972270 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.65 54.0 5.10e-01 98.2% 81.4%
4958468 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.65 56.0 5.57e-01 98.2% 91.7%
3970053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 5.34e-01 91.1% 96.0%
3972272 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.65 54.0 5.02e-01 98.2% 78.7%
3289034 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 53.0 5.19e-01 96.4% 90.5%
3290024 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 54.0 4.94e-01 100.0% 72.5%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 48.0 5.05e-01 91.1% 90.0%
4661582 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 53.0 4.41e-01 96.4% 51.8%
4099721 101.1.3.24 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF27685 0.65 55.0 4.61e-01 100.0% 55.0%
165630 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 54.0 5.18e-01 98.2% 87.9%
3945219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 53.0 4.41e-01 100.0% 50.0%
3797530 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.65 51.0 4.90e-01 98.2% 73.8%
4404485 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.64 53.0 5.21e-01 96.4% 91.7%
4010691 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.64 52.0 5.27e-01 98.2% 94.5%
2332937 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.63 53.0 4.95e-01 100.0% 79.7%
3286796 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.63 54.0 4.61e-01 100.0% 64.2%
3280235 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.63 53.0 4.93e-01 100.0% 77.3%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.63 52.0 5.14e-01 98.2% 93.3%
3980681 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.63 51.0 4.72e-01 100.0% 77.5%
3991300 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 50.0 4.49e-01 98.2% 62.5%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 49.0 4.86e-01 100.0% 83.3%
3971414 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.62 53.0 5.19e-01 100.0% 91.7%
3946019 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.61 50.0 4.44e-01 98.2% 74.4%
5010276 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.60 51.0 4.03e-01 100.0% 88.5%
3372352 101.1.1.69 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_7 0.60 50.0 4.74e-01 98.2% 77.1%
3976506 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.59 48.0 4.50e-01 100.0% 77.3%
4010187 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.58 47.0 4.19e-01 98.2% 70.0%
4998383 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.58 47.0 4.10e-01 96.4% 80.0%
5016142 5060.1.1.1 alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 0.58 51.0 4.15e-01 98.2% 68.6%
3587054 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.58 46.0 4.19e-01 98.2% 75.3%
4186195 1079.1.1.8 alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › LysE 0.54 39.0 2.78e-01 82.1% 74.8%
5005999 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.54 42.0 2.78e-01 92.9% 22.8%
3222238 101.1.2.649 alpha arrays › HTH › HTH › winged helix domain › PF28730 0.53 44.0 4.21e-01 100.0% 97.1%
4990171 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.50 41.0 2.70e-01 98.2% 38.0%