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IMGVR_UViG_3300035052_000021-3300035052-Ga0376524_001019_10237_10377

Arc-Vir

IMGVR_UViG_3300035052_000021-3300035052-Ga0376524_001019_10237_10377

Identity

Kingdom:
archaea

Quality

78.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-45
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3iylU02 1.10.287.1520 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 65.0 6.08e-01 100.0% 79.2%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 62.0 3.84e-01 92.5% 27.0%
1td6A01 1.20.1480.10 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 0.74 62.0 4.63e-01 95.0% 95.1%
1a36A04 1.10.132.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.74 63.0 4.04e-01 92.5% 26.3%
1cpyA02 1.10.287.410 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 53.0 4.70e-01 100.0% 62.5%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 47.0 3.56e-01 80.0% 29.9%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.67 57.0 5.39e-01 97.5% 79.2%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 59.0 4.80e-01 100.0% 54.9%
2rreA00 1.10.10.2010 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 55.0 4.55e-01 97.5% 58.1%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.61 49.0 4.26e-01 100.0% 56.3%
2hldQ02 6.10.140.880 Special › Helix non-globular › Helix Hairpins › 0.53 32.0 3.38e-01 85.0% 95.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3672 4270.1.1.1 ↗ alpha bundles › N-terminal domain of Hypothetical protein MPN330 › N-terminal domain of Hypothetical protein MPN330 › N-terminal domain of Hypothetical protein MPN330 › DUF3196 0.74 62.0 4.63e-01 95.0% 95.1%
3741951 3226.1.1.2 ↗ alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Sulfate_transp 0.74 63.0 3.58e-01 100.0% 10.1%
4784164 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.70 61.0 5.01e-01 100.0% 55.7%
3997427 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.68 60.0 5.12e-01 100.0% 61.5%
3264784 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.68 60.0 3.38e-01 100.0% 8.5%
3907526 541.1.1.2 ↗ alpha duplicates or obligate multimers › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dpy-30 0.67 50.0 4.75e-01 85.0% 66.0%
3220585 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.65 49.0 4.49e-01 87.5% 61.8%
4958320 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 57.0 3.80e-01 100.0% 27.7%
3448503 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.60 38.0 3.62e-01 72.5% 46.0%