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IMGVR_UViG_3300035052_000107-3300035052-Ga0376524_006087_4045_4272
Arc-VirIMGVR_UViG_3300035052_000107-3300035052-Ga0376524_006087_4045_4272
Identity
- Kingdom:
- archaea
Quality
58.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-74
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 3.94e-01 | 97.3% | 85.3% |
| 3ii6X02 | 6.10.250.520 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 48.0 | 4.64e-01 | 73.0% | 87.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953197 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.84 | 67.0 | 4.97e-01 | 91.9% | 38.9% |
| 3866492 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.80 | 69.0 | 4.22e-01 | 97.3% | 28.4% |
| 3731634 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.78 | 62.0 | 3.98e-01 | 86.5% | 20.0% |
| 3447755 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.77 | 56.0 | 3.87e-01 | 83.8% | 23.1% |
| 4262488 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 60.0 | 4.06e-01 | 94.6% | 32.3% |
| None | — | 0.66 | 53.0 | 3.19e-01 | 94.6% | 12.9% | |
| 3665356 | 109.3.1.184 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, NPR1_like_C, Ank_2 | 0.61 | 53.0 | 3.57e-01 | 100.0% | 51.7% |