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IMGVR_UViG_3300035099_000586-3300035099-Ga0373621_000967_28623_30239
Arc-VirIMGVR_UViG_3300035099_000586-3300035099-Ga0373621_000967_28623_30239
Identity
- Kingdom:
- archaea
Quality
71.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-69
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.73 | 58.0 | 5.31e-01 | 87.0% | 93.4% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.72 | 57.0 | 4.42e-01 | 88.4% | 63.5% |
| 1w63A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.71 | 55.0 | 3.24e-01 | 85.5% | 11.0% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.67 | 49.0 | 4.61e-01 | 81.2% | 78.4% |
| 5fhiA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 50.0 | 4.01e-01 | 84.1% | 66.2% |
| 2e5vA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.64 | 49.0 | 4.41e-01 | 82.6% | 59.8% |
| 2o36A01 | 1.20.1050.40 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Endopeptidase. Chain P; domain 1 | 0.64 | 45.0 | 3.73e-01 | 73.9% | 64.8% |
| 2jifA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.64 | 52.0 | 4.50e-01 | 94.2% | 68.6% |
| 3l9tA01 | 1.10.1240.70 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.62 | 43.0 | 4.11e-01 | 79.7% | 61.4% |
| 4gytA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.61 | 51.0 | 3.94e-01 | 98.6% | 46.9% |
| 2g1pA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.60 | 50.0 | 4.58e-01 | 100.0% | 87.0% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.60 | 43.0 | 3.81e-01 | 76.8% | 83.0% |
| 2yvyA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.60 | 41.0 | 3.44e-01 | 72.5% | 40.0% |
| 4ri6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 41.0 | 3.48e-01 | 73.9% | 55.5% |
| 1hqoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 46.0 | 3.82e-01 | 88.4% | 74.0% |
| 5x9vA01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.58 | 51.0 | 3.53e-01 | 100.0% | 56.7% |
| 3qbrX00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.56 | 46.0 | 3.65e-01 | 97.1% | 44.7% |
| 7miqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 41.0 | 3.50e-01 | 78.3% | 75.5% |
| 1m33A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 49.0 | 3.34e-01 | 100.0% | 38.7% |
| 4ys0A02 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.55 | 43.0 | 3.30e-01 | 91.3% | 35.3% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.55 | 46.0 | 4.23e-01 | 100.0% | 84.8% |
| 1w36F02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 41.0 | 3.66e-01 | 81.2% | 96.0% |
| 4xxiA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.54 | 44.0 | 3.54e-01 | 94.2% | 46.3% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 37.0 | 3.37e-01 | 75.4% | 83.3% |
| 4ar9A02 | 1.10.390.20 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › | 0.52 | 45.0 | 3.58e-01 | 95.7% | 57.0% |
| 1q2lA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 43.0 | 3.11e-01 | 97.1% | 53.9% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2055366 | 622.1.1.2 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HsbA | 0.74 | 50.0 | 4.75e-01 | 71.0% | 92.7% |
| 3247734 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 55.0 | 3.60e-01 | 81.2% | 19.3% |
| 3470544 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.71 | 49.0 | 4.42e-01 | 72.5% | 92.6% |
| 5044676 | 109.61.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Uncharacterized protein PF2048.1 › Uncharacterized protein PF2048.1 | 0.70 | 53.0 | 5.48e-01 | 88.4% | 86.2% |
| 5061970 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.70 | 53.0 | 3.86e-01 | 81.2% | 45.9% |
| 1877520 | 604.1.1.7 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7 | 0.68 | 49.0 | 4.08e-01 | 75.4% | 82.2% |
| 3783163 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 46.0 | 4.44e-01 | 71.0% | 85.0% |
| 3684713 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 52.0 | 3.52e-01 | 88.4% | 29.1% |
| 3594006 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 55.0 | 3.34e-01 | 91.3% | 15.2% |
| 4033104 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.66 | 47.0 | 4.84e-01 | 75.4% | 81.5% |
| 3898383 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 46.0 | 3.86e-01 | 75.4% | 72.8% |
| 3484908 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 44.0 | 3.84e-01 | 71.0% | 86.7% |
| 3608253 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.64 | 46.0 | 5.06e-01 | 76.8% | 96.4% |
| 3692803 | 1147.1.1.3 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › CNNM | 0.62 | 43.0 | 3.63e-01 | 73.9% | 43.5% |
| 3431415 | 6155.1.1.6 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF2921 | 0.60 | 41.0 | 3.93e-01 | 73.9% | 82.4% |
| 4027147 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.57 | 41.0 | 3.34e-01 | 76.8% | 77.7% |
| 3822 | 604.4.1.1 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP › AHSP | 0.57 | 43.0 | 4.01e-01 | 85.5% | 85.6% |
| 3669473 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.56 | 50.0 | 3.32e-01 | 100.0% | 35.4% |
| 3205874 | 109.1.1.16 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_6 | 0.55 | 39.0 | 3.15e-01 | 76.8% | 76.7% |
| 3989506 | 3721.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain | 0.53 | 39.0 | 4.02e-01 | 79.7% | 83.1% |
| 4004110 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.52 | 42.0 | 3.59e-01 | 97.1% | 76.2% |
| 3673090 | 529.1.1.0 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) | 0.51 | 40.0 | 3.94e-01 | 91.3% | 83.8% |
D2
high
residues 74-161
D3
high
residues 173-305
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 47.0 | 5.95e-01 | 83.5% | 90.2% |
| 1wydA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 49.0 | 5.62e-01 | 98.5% | 88.2% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 50.0 | 5.64e-01 | 98.5% | 90.2% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 46.0 | 5.51e-01 | 98.5% | 95.6% |
| 1v1pB02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 40.0 | 5.15e-01 | 82.0% | 98.6% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 48.0 | 5.59e-01 | 97.7% | 95.8% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 48.0 | 5.39e-01 | 98.5% | 87.7% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.70 | 38.0 | 4.96e-01 | 71.4% | 94.6% |
| 4l5rC02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 45.0 | 5.32e-01 | 98.5% | 95.5% |
| 2k5vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 46.0 | 5.34e-01 | 97.7% | 90.8% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 46.0 | 5.18e-01 | 98.5% | 86.4% |
| 3nemA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 47.0 | 5.18e-01 | 98.5% | 87.6% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 47.0 | 4.98e-01 | 98.5% | 77.0% |
| 1wi5A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 39.0 | 4.96e-01 | 97.0% | 100.0% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 44.0 | 5.24e-01 | 98.5% | 95.7% |
| 3i7fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 49.0 | 5.05e-01 | 98.5% | 77.3% |
| 4jbmB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 40.0 | 4.68e-01 | 71.4% | 82.3% |
| 6tnyB02 | 2.40.50.430 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 42.0 | 4.55e-01 | 97.7% | 74.1% |
| 1bbuA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 50.0 | 4.95e-01 | 98.5% | 72.9% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 46.0 | 4.95e-01 | 98.5% | 81.6% |
| 1eovA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 50.0 | 5.04e-01 | 98.5% | 76.9% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.67 | 33.0 | 4.40e-01 | 75.2% | 92.5% |
| 4jbjA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 44.0 | 4.87e-01 | 79.7% | 82.7% |
| 1l1oF01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 51.0 | 5.23e-01 | 98.5% | 82.4% |
| 4up7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 49.0 | 4.68e-01 | 98.5% | 67.1% |
| 3o2zP00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 44.0 | 4.68e-01 | 99.2% | 78.4% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 47.0 | 5.05e-01 | 98.5% | 86.8% |
| 2eqsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 40.0 | 4.74e-01 | 98.5% | 92.1% |
| 6nrzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 52.0 | 4.97e-01 | 97.7% | 73.5% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 48.0 | 4.84e-01 | 98.5% | 77.0% |
| 4joiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 49.0 | 4.84e-01 | 99.2% | 75.9% |
| 2e8gA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 40.0 | 4.30e-01 | 92.5% | 75.0% |
| 1fguB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 46.0 | 5.11e-01 | 97.7% | 98.1% |
| 2m9vA00 | 2.40.50.960 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 53.0 | 4.82e-01 | 97.7% | 83.5% |
| 4gnxC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 53.0 | 4.71e-01 | 98.5% | 84.2% |
| 2gpiA00 | 3.30.160.140 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Shew3726-like | 0.55 | 37.0 | 4.32e-01 | 94.0% | 100.0% |
| 6rarI02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 35.0 | 4.14e-01 | 70.7% | 100.0% |
| 5cenA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 29.0 | 3.58e-01 | 82.0% | 89.7% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.52 | 37.0 | 3.52e-01 | 79.7% | 62.7% |
| 8c5yA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 48.0 | 4.39e-01 | 98.5% | 88.8% |
| 4l8jA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.50 | 31.0 | 3.44e-01 | 78.9% | 80.6% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4144799 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.78 | 42.0 | 5.73e-01 | 71.4% | 100.0% |
| 4993339 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 53.0 | 6.04e-01 | 98.5% | 91.0% |
| 5027798 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 48.0 | 5.94e-01 | 98.5% | 97.6% |
| 4259684 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 51.0 | 5.62e-01 | 98.5% | 80.9% |
| 3969368 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 51.0 | 5.54e-01 | 98.5% | 80.9% |
| 4107771 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.76 | 51.0 | 5.33e-01 | 98.5% | 74.2% |
| 5030948 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 48.0 | 5.18e-01 | 97.7% | 73.9% |
| 4182108 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.76 | 50.0 | 5.38e-01 | 98.5% | 77.4% |
| 4554456 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 50.0 | 5.61e-01 | 98.5% | 85.7% |
| 4101241 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.75 | 47.0 | 5.41e-01 | 85.7% | 84.0% |
| 4297076 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.74 | 48.0 | 4.95e-01 | 86.5% | 68.8% |
| 5056435 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 47.0 | 5.65e-01 | 97.0% | 94.4% |
| 4450697 | 2007.1.12.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase | 0.74 | 47.0 | 3.55e-01 | 86.5% | 28.8% |
| 4255386 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.73 | 46.0 | 5.32e-01 | 86.5% | 85.0% |
| 5060970 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.73 | 49.0 | 5.14e-01 | 100.0% | 75.0% |
| 5031432 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.72 | 49.0 | 5.44e-01 | 98.5% | 86.7% |
| 4974918 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.72 | 48.0 | 5.42e-01 | 98.5% | 86.7% |
| 4934695 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 47.0 | 5.02e-01 | 98.5% | 77.4% |
| 5022421 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.70 | 48.0 | 5.00e-01 | 98.5% | 74.4% |
| 4071867 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.70 | 52.0 | 5.43e-01 | 98.5% | 82.4% |
| 3379227 | 2.1.1.29 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep-A_N | 0.70 | 49.0 | 5.05e-01 | 98.5% | 76.0% |
| 3412221 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 48.0 | 4.97e-01 | 99.2% | 75.2% |
| 4454256 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.69 | 50.0 | 4.84e-01 | 98.5% | 67.6% |
| 3906493 | 2.1.1.142 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB | 0.68 | 49.0 | 4.95e-01 | 98.5% | 74.6% |
| 3210094 | 2.1.1.289 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon, Rep-A_N | 0.68 | 48.0 | 3.67e-01 | 98.5% | 33.0% |
| 3900774 | 2.1.1.50 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TPP1 | 0.68 | 54.0 | 5.23e-01 | 97.7% | 75.2% |
| 4358802 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 49.0 | 5.32e-01 | 98.5% | 88.2% |
| 4599318 | 2.1.1.299 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S12 | 0.68 | 41.0 | 5.18e-01 | 98.5% | 100.0% |
| 3259503 | 2.1.1.142 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB | 0.68 | 46.0 | 4.89e-01 | 98.5% | 76.7% |
| 4014974 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 49.0 | 3.75e-01 | 99.2% | 34.7% |
| 3598854 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 45.0 | 4.44e-01 | 100.0% | 64.3% |
| 5069068 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 45.0 | 5.33e-01 | 97.7% | 97.9% |
| 5037301 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.67 | 46.0 | 5.39e-01 | 98.5% | 98.9% |
| 2579126 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.67 | 45.0 | 4.40e-01 | 100.0% | 63.2% |
| 5058918 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 45.0 | 4.87e-01 | 98.5% | 80.0% |
| 5030515 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.67 | 48.0 | 5.12e-01 | 98.5% | 85.2% |
| 4288521 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 49.0 | 4.74e-01 | 97.7% | 68.0% |
| 4934697 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 47.0 | 5.31e-01 | 98.5% | 96.0% |
| 4882592 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.66 | 45.0 | 4.35e-01 | 100.0% | 62.3% |
| 3699896 | 2.1.1.142 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB | 0.66 | 46.0 | 4.90e-01 | 98.5% | 81.7% |
| 4646070 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 47.0 | 5.11e-01 | 98.5% | 88.2% |
| 4026302 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 50.0 | 4.85e-01 | 98.5% | 71.7% |
| 5059130 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 49.0 | 5.36e-01 | 98.5% | 93.6% |
| 5043054 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 46.0 | 5.24e-01 | 98.5% | 96.0% |
| 3506791 | 2.1.1.69 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 | 0.65 | 51.0 | 4.99e-01 | 99.2% | 74.5% |
| 5069581 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 47.0 | 5.08e-01 | 98.5% | 88.2% |
| 4326939 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.65 | 47.0 | 4.76e-01 | 98.5% | 73.3% |
| 4938727 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 45.0 | 5.31e-01 | 70.7% | 100.0% |
| 3901699 | 2.1.1.173 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RADX | 0.65 | 49.0 | 4.70e-01 | 97.7% | 67.7% |
| 4311381 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.65 | 50.0 | 4.88e-01 | 98.5% | 73.8% |
| 4945682 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 48.0 | 4.93e-01 | 98.5% | 80.8% |
| 3259004 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 53.0 | 5.12e-01 | 98.5% | 78.6% |
| 3440492 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.64 | 51.0 | 5.26e-01 | 82.7% | 87.2% |
| 5078989 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 51.0 | 5.08e-01 | 98.5% | 81.5% |
| 3614430 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 50.0 | 4.68e-01 | 99.2% | 68.1% |
| 5004339 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 53.0 | 4.93e-01 | 98.5% | 70.8% |
| 5062351 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 46.0 | 4.93e-01 | 98.5% | 87.0% |
| 3459866 | 2.1.1.143 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF936 | 0.63 | 49.0 | 5.02e-01 | 98.5% | 83.1% |
| 3734354 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.63 | 49.0 | 4.84e-01 | 99.2% | 76.4% |
| 3668618 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 51.0 | 4.11e-01 | 98.5% | 45.6% |
| 4978950 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.62 | 50.0 | 4.84e-01 | 98.5% | 76.6% |
| 4950417 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 50.0 | 4.39e-01 | 98.5% | 58.9% |
| 3811667 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.62 | 52.0 | 4.86e-01 | 98.5% | 72.1% |
| 4129337 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.62 | 49.0 | 4.51e-01 | 98.5% | 66.1% |
| 3678706 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 51.0 | 5.18e-01 | 97.7% | 89.2% |
| 4220176 | 2.1.1.289 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon, Rep-A_N | 0.61 | 46.0 | 3.63e-01 | 98.5% | 39.2% |
| 3504779 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 44.0 | 4.76e-01 | 98.5% | 87.0% |
| 5055030 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 51.0 | 5.07e-01 | 98.5% | 85.0% |
| 3304867 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 53.0 | 5.22e-01 | 99.2% | 87.1% |
| 3733907 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.60 | 46.0 | 4.59e-01 | 98.5% | 77.8% |
| 3632444 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 49.0 | 4.76e-01 | 98.5% | 78.6% |
| 5028505 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.60 | 43.0 | 4.30e-01 | 89.5% | 71.4% |
| 3822460 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 46.0 | 4.07e-01 | 82.0% | 100.0% |
| 5082490 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 50.0 | 5.25e-01 | 98.5% | 99.2% |
| 3585962 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.58 | 54.0 | 5.03e-01 | 98.5% | 84.4% |
| 3888826 | 2.1.1.255 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31100 | 0.58 | 48.0 | 4.69e-01 | 97.7% | 80.7% |
| 3337634 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.55 | 51.0 | 4.79e-01 | 98.5% | 88.1% |
| 3401966 | 2.1.1.350 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30298 | 0.55 | 51.0 | 4.58e-01 | 99.2% | 77.8% |
| 3658019 | 2.1.1.285 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3, CDC24_OB2 | 0.55 | 49.0 | 3.73e-01 | 95.5% | 45.3% |
| 3670182 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.55 | 38.0 | 3.97e-01 | 97.0% | 76.0% |
| 3603239 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.55 | 50.0 | 4.82e-01 | 98.5% | 87.3% |
| 3711372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 49.0 | 4.27e-01 | 97.7% | 78.0% |
D4
high
residues 452-533
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.63 | 37.0 | 3.85e-01 | 90.2% | 61.5% |
| 1zzgA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 42.0 | 2.98e-01 | 72.0% | 82.9% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.60 | 46.0 | 4.25e-01 | 82.9% | 100.0% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.58 | 41.0 | 3.94e-01 | 74.4% | 83.3% |
| 2dbhA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 48.0 | 4.85e-01 | 92.7% | 98.7% |
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.58 | 48.0 | 4.68e-01 | 91.5% | 92.3% |
| 2ch5B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 44.0 | 3.35e-01 | 82.9% | 59.5% |
| 2jnsA01 | 1.20.1270.220 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 42.0 | 4.27e-01 | 97.6% | 85.2% |
| 7lwzB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.54 | 43.0 | 3.36e-01 | 87.8% | 70.2% |
| 3bg2A01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.53 | 40.0 | 3.21e-01 | 82.9% | 88.9% |
| 1sxjA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.53 | 44.0 | 4.00e-01 | 96.3% | 93.2% |
| 2lwdA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 44.0 | 4.24e-01 | 95.1% | 92.7% |
| 7kypB01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.52 | 42.0 | 2.97e-01 | 90.2% | 80.1% |
| 2m7bA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 37.0 | 3.88e-01 | 91.5% | 81.8% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 47.0 | 4.03e-01 | 96.3% | 70.8% |
| 2qgaB03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.51 | 37.0 | 4.00e-01 | 79.3% | 97.0% |
| 3od1A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 41.0 | 2.77e-01 | 90.2% | 32.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3800778 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 43.0 | 3.34e-01 | 85.4% | 61.0% |
| 3516297 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.56 | 42.0 | 3.23e-01 | 82.9% | 58.0% |
| 2062663 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.54 | 45.0 | 3.22e-01 | 93.9% | 60.8% |
| 3218304 | 101.1.4.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT | 0.53 | 43.0 | 4.10e-01 | 95.1% | 75.8% |
| 4873484 | 150.2.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Cobalamin adenosyltransferase › Cobalamin adenosyltransferase › Cob_adeno_trans | 0.52 | 43.0 | 3.88e-01 | 97.6% | 94.5% |
| 4522200 | 3684.1.1.1 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF615 | 0.52 | 38.0 | 3.79e-01 | 78.0% | 85.9% |
| 3639813 | 170.2.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain | 0.50 | 42.0 | 4.27e-01 | 91.5% | 98.8% |
D5
medium
residues 347-442
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dcmB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.87e-01 | 74.0% | 99.0% |
| 1hr7C02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 41.0 | 3.20e-01 | 87.5% | 85.8% |