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IMGVR_UViG_3300035099_000682-3300035099-Ga0373621_000967_3030_3482

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300035099_000682-3300035099-Ga0373621_000967_3030_3482 ↗
Kingdom:: archaea

Quality

69.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-57

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2hh6A00	1.10.1900.10	Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein	0.66	56.0	4.59e-01	98.2%	53.2%
2vwaA00	1.20.58.1330	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein	0.65	54.0	4.42e-01	89.5%	67.7%
5cqfA00	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.63	48.0	2.85e-01	82.5%	81.1%
4f03B02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.62	47.0	3.53e-01	82.5%	35.2%
6tkvA01	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.62	49.0	4.66e-01	87.7%	73.5%
2cfoA04	1.10.8.70	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1	0.62	42.0	4.34e-01	77.2%	75.9%
5i1uA00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.62	52.0	3.31e-01	94.7%	18.3%
3p42A02	6.10.250.2280	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.56	50.0	4.73e-01	100.0%	84.3%
4kjmA02	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.56	47.0	4.80e-01	98.2%	96.4%
3favD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.55	42.0	3.91e-01	87.7%	65.4%
4ociA01	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.54	40.0	3.91e-01	86.0%	92.4%
4b3hA03	1.10.1040.50	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 ›	0.51	43.0	3.01e-01	100.0%	94.8%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3716291	142.1.1.0 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors	0.72	58.0	4.98e-01	87.7%	61.1%
3787011	102.1.2.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase	0.71	43.0	3.62e-01	98.2%	37.8%
3770592	192.15.1.145 ↗	alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Xin	0.71	51.0	4.83e-01	84.2%	62.9%
5065974	247.1.1.1 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B	0.71	52.0	3.21e-01	77.2%	20.3%
3789467	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.68	53.0	4.44e-01	84.2%	67.4%
4013552	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.64	38.0	3.04e-01	84.2%	30.0%
4100502	3455.1.1.12 ↗	alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors › PF31207	0.61	41.0	4.12e-01	70.2%	83.3%
4440612	184.1.1.1 ↗	alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N	0.58	42.0	4.02e-01	75.4%	66.2%

D2 medium residues 58-145

PDB