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IMGVR_UViG_3300035145_003323-3300035145-Ga0373595_0013502_3695_4141
Arc-VirIMGVR_UViG_3300035145_003323-3300035145-Ga0373595_0013502_3695_4141
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-79
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02562.23 best | PhoH | 37.8 | 2.10e-09 | 81.4% | 21.0% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7nadx01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 64.0 | 4.30e-01 | 93.2% | 33.3% |
| 1qhhA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 56.0 | 4.11e-01 | 93.2% | 32.9% |
| 3fcnA00 | 1.20.1220.20 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Uncharcterised protein PF01724 | 0.67 | 50.0 | 3.68e-01 | 81.4% | 49.4% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 53.0 | 4.50e-01 | 91.5% | 83.0% |
| 2w9mA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.56 | 42.0 | 4.06e-01 | 81.4% | 86.8% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 40.0 | 3.36e-01 | 83.1% | 57.7% |
| 5dz2A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 44.0 | 2.88e-01 | 93.2% | 93.8% |
| 2c35A00 | 1.20.1250.40 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit | 0.54 | 43.0 | 3.46e-01 | 91.5% | 46.9% |
| 2m0aA01 | 3.10.20.350 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 38.0 | 3.29e-01 | 78.0% | 69.9% |
| 2wdtA01 | 1.10.418.80 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 1 | 0.51 | 38.0 | 3.18e-01 | 81.4% | 57.7% |
| 4n81A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.50 | 33.0 | 2.72e-01 | 71.2% | 59.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3624192 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.73 | 64.0 | 3.80e-01 | 100.0% | 52.8% |
| 3673003 | 3922.1.1.254 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › NET2A_C | 0.59 | 41.0 | 3.33e-01 | 74.6% | 83.2% |
D2
medium
residues 80-149
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02562.23 best | PhoH | 68.4 | 9.00e-19 | 100.0% | 34.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o53A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 45.0 | 3.10e-01 | 95.7% | 30.7% |
| 1o5xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 45.0 | 3.12e-01 | 95.7% | 31.3% |
| 3rpjA00 | 3.30.310.230 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sigma factor-binding protein Crl monomer | 0.52 | 37.0 | 3.08e-01 | 75.7% | 73.0% |
| 4v19K02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.51 | 34.0 | 3.35e-01 | 95.7% | 64.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956232 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.87 | 79.0 | 5.34e-01 | 100.0% | 29.2% |
| 3959799 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.87 | 79.0 | 5.38e-01 | 100.0% | 30.0% |
| 3944062 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.87 | 80.0 | 5.34e-01 | 100.0% | 28.0% |
| 3980599 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.80 | 72.0 | 4.87e-01 | 100.0% | 29.0% |
| 5023408 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.76 | 69.0 | 4.84e-01 | 100.0% | 33.8% |
| 5019115 | 2004.1.1.260 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MEDS | 0.65 | 55.0 | 3.85e-01 | 100.0% | 31.2% |
| 4480820 | 7583.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › ARMT1-like_dom | 0.54 | 48.0 | 3.14e-01 | 100.0% | 27.5% |
| 3295061 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 44.0 | 3.81e-01 | 100.0% | 73.3% |
| 3593156 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.51 | 35.0 | 2.52e-01 | 71.4% | 82.1% |