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IMGVR_UViG_3300035205_000874-3300035205-Ga0373649_0001757_24493_25131
Arc-VirIMGVR_UViG_3300035205_000874-3300035205-Ga0373649_0001757_24493_25131
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 159-202
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7aj9A01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.68 | 46.0 | 4.08e-01 | 75.0% | 47.8% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.66 | 46.0 | 3.81e-01 | 77.3% | 42.4% |
| 1eakA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.65 | 49.0 | 4.48e-01 | 97.7% | 60.3% |
| 4jd9G00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.58 | 44.0 | 3.48e-01 | 97.7% | 84.2% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.57 | 47.0 | 3.93e-01 | 100.0% | 86.0% |
| 3qf3D00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 42.0 | 3.13e-01 | 100.0% | 54.7% |
| 2oyoA01 | 1.20.5.810 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › AhpD-like | 0.50 | 34.0 | 3.35e-01 | 72.7% | 86.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5013188 | 2484.1.1.30 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N | 0.91 | 75.0 | 4.64e-01 | 100.0% | 17.7% |
| 5024230 | 2484.1.1.30 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N | 0.91 | 81.0 | 5.13e-01 | 100.0% | 21.5% |
| 5079664 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.90 | 79.0 | 4.95e-01 | 100.0% | 20.5% |
| 3972046 | 2484.1.1.30 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N | 0.90 | 78.0 | 4.91e-01 | 100.0% | 20.5% |
| 5029316 | 2484.1.1.30 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N | 0.87 | 72.0 | 4.61e-01 | 100.0% | 20.5% |
| 3603099 | 2484.1.1.30 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N | 0.82 | 72.0 | 4.57e-01 | 100.0% | 27.9% |
| 3705852 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.51 | 37.0 | 3.76e-01 | 84.1% | 84.4% |
| 3721100 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.51 | 35.0 | 2.22e-01 | 77.3% | 83.8% |
| 3249191 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.51 | 43.0 | 2.78e-01 | 100.0% | 32.4% |
D2
medium
residues 2-152
Domain cluster:
rep: AP018399.1__BBA65481.1__X__00333__D5-109_304-319
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02543.22 best | Carbam_trans_N | 28.0 | 2.10e-06 | 62.3% | 13.3% |