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IMGVR_UViG_3300035208_006812-3300035208-Ga0376279_0001310_23693_24697
Arc-VirIMGVR_UViG_3300035208_006812-3300035208-Ga0376279_0001310_23693_24697
Identity
- Kingdom:
- archaea
Quality
72.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-116
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.68 | 40.0 | 4.41e-01 | 97.2% | 72.1% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.51 | 36.0 | 3.47e-01 | 96.3% | 65.0% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 36.0 | 3.95e-01 | 98.1% | 97.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960055 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.94 | 91.0 | 8.16e-01 | 100.0% | 77.5% |
| 3166306 | 50.1.1.4 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › DUF2213 | 0.79 | 72.0 | 6.31e-01 | 100.0% | 68.6% |
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.73 | 68.0 | 6.15e-01 | 100.0% | 77.9% |
| 5078891 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.58 | 31.0 | 3.97e-01 | 88.0% | 98.2% |
| 3306957 | 1.1.3.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › DUF7271 | 0.57 | 32.0 | 3.93e-01 | 85.2% | 96.7% |
| 3515518 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.55 | 42.0 | 4.04e-01 | 97.2% | 69.6% |
| 5017739 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.51 | 42.0 | 3.30e-01 | 91.7% | 64.0% |
| 3941219 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 37.0 | 2.54e-01 | 76.9% | 36.7% |