Back to structures

IMGVR_UViG_3300035436_000274-3300035436-Ga0394079_23898_11256_11537

Arc-Vir

IMGVR_UViG_3300035436_000274-3300035436-Ga0394079_23898_11256_11537

Quality

76.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-68
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ae2A01 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.67 47.0 3.59e-01 76.5% 35.8%
4m2mA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 44.0 3.31e-01 73.5% 33.1%
4bfmA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 36.0 2.40e-01 73.5% 62.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3212195 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.76 65.0 5.47e-01 92.6% 58.2%
3188109 102.5.1.9 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › DUF7898 0.72 57.0 5.13e-01 94.1% 63.3%
3268481 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.64 51.0 5.12e-01 85.3% 85.7%
3301615 103.5.1.0 alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like 0.60 39.0 4.06e-01 70.6% 70.8%
4015200 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.52 37.0 2.74e-01 83.8% 24.5%