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IMGVR_UViG_3300035436_000274-3300035436-Ga0394079_23898_14117_14560
Arc-VirIMGVR_UViG_3300035436_000274-3300035436-Ga0394079_23898_14117_14560
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-118
Domain cluster:
rep: IMGVR_UViG_3300002123_000235-3300002123-C687J26634_1000017526__D5-94_129-160
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rkxA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.64 | 54.0 | 4.34e-01 | 95.8% | 58.5% |
| 1pu1A00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.60 | 49.0 | 5.04e-01 | 95.8% | 94.5% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.56 | 45.0 | 4.13e-01 | 87.4% | 86.4% |
| 4k1pE00 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.52 | 41.0 | 2.92e-01 | 87.4% | 43.1% |
| 6l3tA01 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.52 | 41.0 | 3.29e-01 | 87.4% | 72.9% |
| 4pz6A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 41.0 | 3.16e-01 | 89.5% | 75.4% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.51 | 37.0 | 3.02e-01 | 73.7% | 58.0% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 38.0 | 2.88e-01 | 77.9% | 72.3% |
| 1nz8A00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.51 | 40.0 | 3.74e-01 | 88.4% | 68.1% |
| 3bk2A03 | 3.10.20.580 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 37.0 | 3.67e-01 | 94.7% | 75.8% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4976198 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.65 | 53.0 | 5.54e-01 | 98.9% | 100.0% |
| 4970331 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.65 | 47.0 | 4.89e-01 | 88.4% | 84.7% |
| 4948264 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.64 | 49.0 | 5.25e-01 | 93.7% | 100.0% |
| 3511668 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.64 | 58.0 | 3.74e-01 | 100.0% | 43.9% |
| 4022770 | 331.4.1.3 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor | 0.63 | 53.0 | 4.82e-01 | 90.5% | 86.4% |
| 5072826 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.63 | 52.0 | 5.36e-01 | 100.0% | 97.8% |
| 5072187 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.62 | 52.0 | 3.38e-01 | 92.6% | 24.4% |
| 4030266 | 309.1.1.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16,Peptidase_M16_C | 0.60 | 51.0 | 3.82e-01 | 94.7% | 60.4% |
| 3960654 | 239.4.1.2 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › GSIII_N | 0.58 | 32.0 | 3.14e-01 | 100.0% | 48.6% |
| 3184643 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.58 | 46.0 | 4.76e-01 | 95.8% | 92.2% |
| 3241070 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.57 | 39.0 | 2.99e-01 | 71.6% | 83.7% |
| 3724001 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.56 | 40.0 | 3.62e-01 | 73.7% | 93.1% |
| 3778175 | 5052.1.1.1 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF | 0.56 | 48.0 | 3.18e-01 | 100.0% | 78.4% |
| 3931688 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.56 | 23.0 | 3.27e-01 | 81.1% | 88.6% |
| 4824795 | 239.4.1.2 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › GSIII_N | 0.54 | 31.0 | 3.16e-01 | 77.9% | 55.2% |
| 3241726 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 39.0 | 2.72e-01 | 80.0% | 65.5% |
| 3950933 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.52 | 36.0 | 2.71e-01 | 73.7% | 31.3% |
| 4013760 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.51 | 42.0 | 3.20e-01 | 94.7% | 58.1% |
| 3229557 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.51 | 45.0 | 3.02e-01 | 100.0% | 67.0% |
| 3228328 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.50 | 40.0 | 2.78e-01 | 86.3% | 55.1% |