Back to structures

IMGVR_UViG_3300035436_000274-3300035436-Ga0394079_23898_1933_2352

Arc-Vir

IMGVR_UViG_3300035436_000274-3300035436-Ga0394079_23898_1933_2352

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-130
PDB
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.84 69.0 6.35e-01 84.8% 100.0%
4fgoA00 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.76 68.0 5.71e-01 96.4% 74.0%
2f4mA01 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.71 63.0 4.92e-01 96.4% 74.8%
3isrA01 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.68 61.0 5.13e-01 97.3% 94.6%
3bbaA00 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.68 55.0 4.19e-01 85.7% 95.1%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 45.0 3.25e-01 78.6% 99.0%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.58 44.0 3.73e-01 79.5% 97.3%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 36.0 3.97e-01 97.3% 83.0%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 39.0 2.82e-01 74.1% 89.2%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 37.0 4.02e-01 99.1% 84.9%
1j0wB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 36.0 3.77e-01 99.1% 76.7%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 38.0 4.19e-01 89.3% 94.6%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 36.0 4.00e-01 91.1% 89.1%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.51 39.0 3.21e-01 84.8% 87.3%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 34.0 3.77e-01 98.2% 85.9%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4959592 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.87 71.0 6.49e-01 83.9% 82.1%
5064007 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.79 64.0 5.42e-01 86.6% 81.7%
5012995 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.78 68.0 5.48e-01 92.9% 82.9%
4213984 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.77 67.0 5.70e-01 92.9% 81.1%
5014419 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.75 67.0 5.26e-01 95.5% 75.1%
4953249 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.75 60.0 5.35e-01 83.9% 75.5%
4992782 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.75 59.0 5.11e-01 83.0% 100.0%
4634055 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.75 66.0 5.48e-01 94.6% 78.4%
5077834 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.75 59.0 4.37e-01 83.9% 52.9%
3871299 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.74 66.0 5.32e-01 96.4% 69.0%
3704372 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.74 64.0 4.88e-01 92.9% 57.6%
3882396 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.74 66.0 5.14e-01 96.4% 63.0%
4995535 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.73 64.0 5.38e-01 94.6% 87.6%
3929966 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.73 65.0 5.25e-01 96.4% 70.0%
3403157 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.73 62.0 4.90e-01 92.9% 62.6%
3221476 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.71 63.0 5.01e-01 96.4% 64.1%
3627686 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.71 63.0 4.91e-01 96.4% 62.6%
2532980 219.1.1.53 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin 0.70 62.0 4.72e-01 95.5% 76.0%
5029334 219.1.1.76 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.68 62.0 5.38e-01 98.2% 81.5%
3496803 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.60 47.0 4.20e-01 83.0% 98.7%
3257853 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.59 44.0 3.27e-01 79.5% 98.3%
3494259 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.58 43.0 2.90e-01 75.9% 98.8%
4375667 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.58 43.0 2.88e-01 77.7% 93.0%
3615229 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.57 43.0 3.00e-01 77.7% 84.9%
3940432 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.57 44.0 2.97e-01 81.2% 93.2%
3762030 219.1.1.14 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin 0.57 42.0 4.08e-01 77.7% 96.0%
3652683 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.56 44.0 3.09e-01 85.7% 97.7%
None 0.56 42.0 3.00e-01 81.2% 92.0%
3592731 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.56 43.0 3.04e-01 83.0% 92.8%
3255440 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.55 43.0 3.05e-01 83.0% 93.0%
3382767 219.1.1.112 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.55 43.0 3.11e-01 83.0% 94.8%
3358186 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.55 43.0 3.06e-01 83.9% 94.8%
3694580 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 42.0 2.92e-01 82.1% 96.6%
3800929 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 42.0 2.92e-01 84.8% 98.5%
3790685 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 39.0 3.72e-01 100.0% 64.6%
4024708 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 41.0 2.92e-01 84.8% 98.9%
3514586 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 39.0 2.77e-01 81.2% 92.3%
3271037 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 40.0 2.74e-01 82.1% 99.5%
3237895 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 41.0 2.97e-01 83.9% 97.3%
3737025 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 46.0 3.30e-01 100.0% 51.5%
3235400 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.51 36.0 4.02e-01 90.2% 93.3%
3993647 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 45.0 3.30e-01 100.0% 48.6%
3628889 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.50 43.0 3.18e-01 92.9% 81.6%
3268292 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.50 35.0 3.64e-01 99.1% 76.2%